Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
BBa_J61101BBa_J61101 Version 1 (Component)Ribosome Binding Site Family Member
BBa_J61120BBa_J61120 Version 1 (Component)Ribosome Binding Site Family Member
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_J61100BBa_J61100 Version 1 (Component)Ribosome Binding Site Family Member
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
pSB1C3pSB1C3 Version 1 (Component)High copy BioBrick assembly plasmid
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
PBS_F24PBS_F24 Version 1 (Component) BBa_J61127BBa_J61127 Version 1 (Component)Ribosome Binding Site Family Member
BBa_J61107BBa_J61107 Version 1 (Component)Ribosome Binding Site Family Member
BBa_K165002BBa_K165002 Version 1 (Component)Kozak sequence (yeast RBS)
BBa_J85600BBa_J85600 Version 1 (Component)attB1 recombination site
T7 RBSBBa_K1362090 Version 1 (Component)strong T7 RBS
BBa_J61117BBa_J61117 Version 1 (Component)Ribosome Binding Site Family Member
BBa_K118012BBa_K118012 Version 1 (Component)Synthetic ribosome binding site added by Son of Babel procedure
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
BBa_K923005BBa_K923005 Version 1 (Component)Ribosome Binding Site in pET14b plasmid
BBa_K1321003BBa_K1321003 Version 1 (Component)Re-entry of BBa_K863101, Cellulose Binding Domain CBDcex in rfc25
RBS-GsiBBBa_K143020 Version 1 (Component)GsiB ribosome binding site (RBS) for B. subtilis
BBa_I13507BBa_I13507 Version 1 (Component)Screening plasmid intermediate
rbs+LIMS1BBa_I742111 Version 1 (Component)Limonene synthase gene with ribosome binding site
BBa_K1585999BBa_K1585999 Version 1 (Component)lacI binding site
BBa_K1123010BBa_K1123010 Version 1 (Component)Ribosoom Binding Site
rbs+COMTBBa_I742109 Version 1 (Component)COMT gene with ribosome binding site
BBa_J34801BBa_J34801 Version 1 (Component)ribosome binding site
BBa_K150005BBa_K150005 Version 1 (Component)ribosome binding site of pTrc99a
BBa_I742116BBa_I742116 Version 1 (Component)crtE with native ribosome binding site
BBa_M1694BBa_M1694 Version 1 (Component)Ribosome binding site
BBa_J61102BBa_J61102 Version 1 (Component)Ribosome Binding Site Family Member
BBa_J61112BBa_J61112 Version 1 (Component)Ribosome Binding Site Family Member
BBa_I742113BBa_I742113 Version 1 (Component)ech gene with ribosome binding site
BBa_I13504BBa_I13504 Version 1 (Component)Screening plasmid intermediate
BBa_I742117BBa_I742117 Version 1 (Component)CrtY with native ribosome binding site
BBa_K090505BBa_K090505 Version 1 (Component)''Bacillus subtilis'' consensus RBS