iGEM Feature Libraries
igem_feature_libraries_collection Version 1 (Unknown)
A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

Free Genes Feature Libraries
free_genes_feature_libraries_collection Version 1 (Unknown)
A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

Direct Sequence Pull
direct Version 1 (Activity)
Used to indicate that a sequence was pulled directly from a source with no alterations made

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Sequence Pull with Mutations
mutations Version 1 (Activity)
Used to indicate that a sequence had mutations added after pulling from the source and before submission

BBa_I3425
BBa_I3425 Version 1 (Component)
Test: Switch aspartate excretion (I3410.I3200.I3411.E0432.I3100.I3400.I3101.I3400.I3102.I3401)

BBa_I3000
BBa_I3000 Version 1 (Component)
E. colibrator design 1, Polkadorks (I3410.I3200.E0422.I3510.I3401.I3411.B0015.I3100.I3400.I3300.I340

BBa_I3002
BBa_I3002 Version 1 (Component)
E. colibrator design 3, Polkadorks (I3410.I3200.E0422.I3510.I3401.I3411.I0460.I3100.I3400.I3300.I340

BBa_I3424
BBa_I3424 Version 1 (Component)
Test: Switch response to quorum (I3410.E0422.I3411.E0432.I3100.I3400.I3101.I3400.I3510.I3401)

BBa_I3421
BBa_I3421 Version 1 (Component)
Test: Switch response to aspartate input (I3410.E0422.I3411.E0432.I3100.I3400.I3300.I3400.I3102.I340

BBa_I3422
BBa_I3422 Version 1 (Component)
Test: Switch response to aspartate input (I3410.E0422.I3411.E0432.I3100.I3400.I3301.I3400.I3102.I340

BBa_I3423
BBa_I3423 Version 1 (Component)
Test: Switch response to aspartate input (I3410.E0422.I3411.E0432.I3100.I3400.I3302.I3400.I3102.I340

BBa_I3420
BBa_I3420 Version 1 (Component)
Test: Switch functionality and bistability (I3410.E0422.I3411.E0432.I3100.I3400.I3101.I3400.I3102.I3

BBa_I3001
BBa_I3001 Version 1 (Component)
E. colibrator design 2, Polkadorks (I3410.I3200.E0422.I3510.I3401.I3411.B0015.I3100.I3701.I3300.I370

YFP
BBa_E0032 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

BBa_I3600
BBa_I3600 Version 1 (Component)
Test: Chemotaxis response to secreted aspartate, sender cells (I3100.I3200.E0422)

BBa_I3210
BBa_I3210 Version 1 (Component)
Test: AspA attractant sender (I3100.I3200.B0015)

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_I3110
BBa_I3110 Version 1 (Component)
Test: Lac trigger (I3100.E0422)

BBa_I3400
BBa_I3400 Version 1 (Component)
Hk022cI switch input device (B0034.C0050.B0015)

BBa_I3100
BBa_I3100 Version 1 (Component)
Lac stochastic trigger device (R1075.B0034.C0012.B0015.R0010)

BBa_E0430
BBa_E0430 Version 1 (Component)
EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)

BBa_I3521
BBa_I3521 Version 1 (Component)
Test: Quorum threshold level and chemotaxis response, sender cells (I3600.I3520.I3500)

BBa_I3410
BBa_I3410 Version 1 (Component)
Hk022cI switch output device (R0051.B0034.C0050)

BBa_I3111
BBa_I3111 Version 1 (Component)
Test: TetR trigger (I3101.E0422)

BBa_I3101
BBa_I3101 Version 1 (Component)
TetR trigger device (R1075.B0034.C0040.B0015.R0040)

BBa_I3522
BBa_I3522 Version 1 (Component)
Test: Quorum threshold level and chemotaxis response, receiver cells (I3601.I3520.I3500)

BBa_I3310
BBa_I3310 Version 1 (Component)
Test: Tar-EnvZ attractant receiver (I3300.E0422)

BBa_I3112
BBa_I3112 Version 1 (Component)
Test: AraC trigger (I3102.E0422)

BBa_E0422
BBa_E0422 Version 1 (Component)
ECFP (RBS+ LVA+ TERM) (B0034.E0022.B0015)

BBa_I3401
BBa_I3401 Version 1 (Component)
Lambda cI switch input device (B0034.C0051.B0015)

BBa_I13401
BBa_I13401 Version 1 (Component)
GFP reporter for RHS of library test constructs

BBa_E0432
BBa_E0432 Version 1 (Component)
EYFP (RBS+ LVA+ TERM) (B0034.E0032.B0015)

BBa_I3102
BBa_I3102 Version 1 (Component)
AraC trigger device (R1075.I3700)

RE
BBa_J3101 Version 1 (Component)
Recombinational Enhancer (RE) for Hin/Hix inverting

BBa_J04500
BBa_J04500 Version 1 (Component)
IPTG inducible promoter with RBS

BBa_I3411
BBa_I3411 Version 1 (Component)
Lambda cI switch output device (R0050.B0034.C0051)

BBa_I3500
BBa_I3500 Version 1 (Component)
Quorum sender device (R0062.I0461)

BBa_S01004
BBa_S01004 Version 1 (Component)
E0432.R0062.E0422

BBa_I3200
BBa_I3200 Version 1 (Component)
AspA attractant sender device (B0034.C0083)

BBa_I3311
BBa_I3311 Version 1 (Component)
Test: Tar-EnvZ attractant receiver (I3301.E0422)

aspA
BBa_C0083 Version 1 (Component)
aspartate ammonia-lyase

BBa_I6032
BBa_I6032 Version 1 (Component)
Promoter O_H Test R0040.E0430

BBa_I3700
BBa_I3700 Version 1 (Component)
AraC buffer device for OR gate (I3701.R0080)

BBa_I3300
BBa_I3300 Version 1 (Component)
Tar-EnvZ attractant receiver device (R1075.B0034.C0082.B0015.R0082)

BBa_I6031
BBa_I6031 Version 1 (Component)
Promoter O_H Test R0011.E0430

PEST
BBa_J176018 Version 1 (Component)
PEST