Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

hixC
BBa_J44000 Version 1 (Component)
hixC binding site for Salmonella typhimurium Hin recombinase

eyfp
BBa_E0030 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

YFP
BBa_E0032 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

ECFP
BBa_E0022 Version 1 (Component)
enhanced cyan fluorescent protein derived from A. victoria GFP

RE
BBa_J3101 Version 1 (Component)
Recombinational Enhancer (RE) for Hin/Hix inverting

BBa_K318028
BBa_K318028 Version 1 (Component)
hixC + pCons + lox66 + Hin enhancer + SapI + lox71 + hixC

"Lock"
BBa_K318030 Version 1 (Component)
lox66 + rpCons + hixC + lox71 + SapI + T + T + Hin enhancer + HindIII + hixC

Restriction_sites
Restriction_sites Version 1 (Component)
SacI - KpnI - SmaI - BamHI - XbaI - SalI - PstI - SphI - HindIII - NotI

lox71
BBa_I718017 Version 1 (Component)
lox71

BBa_J15001
BBa_J15001 Version 1 (Component)
strong synthetic E. coli ribosome binding site with SacI site.

EYFP
BBa_E0034 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

lox66
BBa_I718016 Version 1 (Component)
lox66

BBa_K318029
BBa_K318029 Version 1 (Component)
lox66 + pCons + SapI + rlox71

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_K886000
BBa_K886000 Version 1 (Component)
Fixed lox71

HIC genera
BBa_K1602020 Version 1 (Component)
Inducible generator of Humicola insolens cutinase (HIC) with N-terminal His-Tag

BBa_J44011
BBa_J44011 Version 1 (Component)
HixC-pBAD-HixC-Tetrev-RBSrev-HixC

HisTag-HIC
BBa_K1602018 Version 1 (Component)
Humicola insolens cutinase with N-terminal His-Tag

Hin
BBa_J31000 Version 1 (Component)
DNA-invertase Hin from Salmonella typhimurium

BBa_S03528
BBa_S03528 Version 1 (Component)
HixC-TetB-HixC-TT-RE

BBa_S03637
BBa_S03637 Version 1 (Component)
HixC : pBad_rev-HixC

BBa_J44012
BBa_J44012 Version 1 (Component)
HixC-pBAD-HixC-RBS-TetF-HixC

BBa_S03529
BBa_S03529 Version 1 (Component)
pBad : HixC

BBa_K649202
BBa_K649202 Version 1 (Component)
PlacIQ-lox71-rfp-lox66-gfp

BBa_S03525
BBa_S03525 Version 1 (Component)
TetB-HixC

BBa_S03624
BBa_S03624 Version 1 (Component)
pBad-HixC-TetB-RBS_rev : HixC

BBa_S03784
BBa_S03784 Version 1 (Component)
hixC-RFP2-TT-hixC

BBa_S03783
BBa_S03783 Version 1 (Component)
hixC-GFP2-TT-hixC

BBa_J44003
BBa_J44003 Version 1 (Component)
HixC-pBad-HixC-RBS-TetF

BBa_S03786
BBa_S03786 Version 1 (Component)
hixC-RFP2-RBS-GFP1-hixC-RFP2-TT-hixC-GFP2-TT-hixC

BBa_S03785
BBa_S03785 Version 1 (Component)
hixC-RFP2-RBS-GFP1-hixC-GFP2-TT-hixC-RFP2-TT-hixC

BBa_S03787
BBa_S03787 Version 1 (Component)
hixC-GFP2-TT-hixC-RFP2-RBS-GFP1-hixC-RFP2-TT-hixC

BBa_S03635
BBa_S03635 Version 1 (Component)
HixC-pBad-HixC-RBS-TetF : HixC-TT-RE

pCon 0.36
BBa_K176009 Version 1 (Component)
constitutive promoter family member J23107 actual sequence (pCon 0.36)

BBa_S03527
BBa_S03527 Version 1 (Component)
HixC-TetF-HixC-TT-RE

BBa_S03718
BBa_S03718 Version 1 (Component)
hixC-GFP2

BBa_S03640
BBa_S03640 Version 1 (Component)
(-1,2) HixC-pBad_rev-HixC-RBS-TetF : HixC

BBa_E2030
BBa_E2030 Version 1 (Component)
enhanced version of EYFP, yeast-optimized

BBa_S03561
BBa_S03561 Version 1 (Component)
pBADrev-hixC

BBa_S03645
BBa_S03645 Version 1 (Component)
pLac : HixC

BBa_S03728
BBa_S03728 Version 1 (Component)
hixC-CreB

BBa_S03738
BBa_S03738 Version 1 (Component)
hixC-RFP2

BBa_J3105
BBa_J3105 Version 1 (Component)
pBad-RBS-HixC-TetB-HixC-TT-RE

BBa_S03522
BBa_S03522 Version 1 (Component)
HixC : TT-RE