SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

lux pR
BBa_R0062 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pR)

luxI
BBa_C0061 Version 1 (Component)
autoinducer synthetase for AHL

luxr
BBa_C0062 Version 1 (Component)
luxR repressor/activator, (no LVA?)

BBa_I13504
BBa_I13504 Version 1 (Component)
Screening plasmid intermediate

BBa_J04450
BBa_J04450 Version 1 (Component)
RFP Coding Device

BBa_I13401
BBa_I13401 Version 1 (Component)
GFP reporter for RHS of library test constructs

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

lux pL
BBa_R0063 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pL)<br>

cI+luxR
BBa_R0065 Version 1 (Component)
Promoter (lambda cI and luxR regulated -- hybrid)

luxI
BBa_C0161 Version 1 (Component)
autoinducer synthetase for AHL (no LVA)

BBa_I13950
BBa_I13950 Version 1 (Component)
Exogenous LuxI Relaxation Oscillator Test Construct (I13940.I13941)

GFP report
BBa_E0240 Version 1 (Component)
GFP generator

YFP
BBa_E0032 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

SEGA021
SEGA021 Version 1 (Component)
natural linear DNA.

BBa_I13951
BBa_I13951 Version 1 (Component)
Exogenous AiiA Relaxation Oscillator Test Construct (I13942.I13943)

SEGA022
SEGA022 Version 1 (Component)
natural linear DNA.

BBa_C0261
BBa_C0261 Version 1 (Component)
AHL-making Enzyme, luxI (+RBS)

LuxR
BBa_I0462 Version 1 (Component)
luxR Protein Generator

BBa_I13500
BBa_I13500 Version 1 (Component)
Screening plasmid intermediate

GFP genera
BBa_E0840 Version 1 (Component)
GFP generator

BBa_I13521
BBa_I13521 Version 1 (Component)
Ptet mRFP

BBa_I13541
BBa_I13541 Version 1 (Component)
Intermediate in two promoter screening plasmid

BBa_I13940
BBa_I13940 Version 1 (Component)
Exogenous LuxI Relaxation Oscillator Test Construct Intermediate (I0500.C0261.E0434)

BBa_I13941
BBa_I13941 Version 1 (Component)
Exogenous LuxI Relaxation Oscillator Test Construct Intermediate (R0062.C0260.E0424)

BBa_K546000
BBa_K546000 Version 1 (Component)
Lux pL controlled LuxR with lux pR autoinducing LuxI(lva tag)- AHL.

BBa_I13542
BBa_I13542 Version 1 (Component)
Intermediate in two promoter screening plasmid

BBa_I13977
BBa_I13977 Version 1 (Component)
intermediate for lac relaxation oscillator

BBa_J09855
BBa_J09855 Version 1 (Component)
Constitutive luxR device with pLuxR

BBa_I13942
BBa_I13942 Version 1 (Component)
Exogenous AiiA Relaxation Oscillator Test Construct Intermediate (I0500.C0260.E0424)

BBa_I13943
BBa_I13943 Version 1 (Component)
Exogenous AiiA Relaxation Oscillator Test Construct Intermediate (R0062.B0034.C0061.E0434)

BBa_I13209
BBa_I13209 Version 1 (Component)
Relaxation Oscillator Test Construct (I13202.B0015.I0460)

pLux/Tet
BBa_K176000 Version 1 (Component)
pLux/Tet Hybrid Promoter: (LuxR+,TetR-)->PoPS

BBa_E0430
BBa_E0430 Version 1 (Component)
EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)

BBa_K176028
BBa_K176028 Version 1 (Component)
TetR repressible AHL->PoPS Receiver (Very High LuxR): pCon 0.70->luxR+pLux/Tet->PoPS

lux pR
BBa_R1062 Version 1 (Component)
Promoter, Standard (luxR and HSL regulated -- lux pR)<br>

BBa_I13976
BBa_I13976 Version 1 (Component)
intermediate for lac relaxation oscillator

BBa_I13210
BBa_I13210 Version 1 (Component)
Lux/Cin Relaxation Oscillator

BBa_I13001
BBa_I13001 Version 1 (Component)
RBS B0030 w/ YFP (-LVA) TT

PEST
BBa_J176018 Version 1 (Component)
PEST

lacI
BBa_Q04121 Version 1 (Component)
QPI (B0034.C0012.B0015.R0011)

BBa_I13908
BBa_I13908 Version 1 (Component)
Synchronized Relaxation Oscillator

BBa_K116641
BBa_K116641 Version 1 (Component)
Reloxilator (Relaxation Oscillator)

BBa_K228011
BBa_K228011 Version 1 (Component)
LuxR-LuxP-SupD

BBa_I13906
BBa_I13906 Version 1 (Component)
Synchronized Relaxation Oscillator

luxR
BBa_R0061 Version 1 (Component)
Promoter (HSL-mediated luxR repressor)

BBa_I12018
BBa_I12018 Version 1 (Component)
Barkai-Leibler Relaxation Oscillator