Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K523003BBa_K523003 Version 1 (Component)malS for BioSandwich
BBa_K523006BBa_K523006 Version 1 (Component)Plac + LacZ + malS
BBa_K523001BBa_K523001 Version 1 (Component)RBS + malS (E. coli periplasmic α-amylase)
malSBO_28902 Version 1 (Component) MalSBO_26621 Version 1 (Component) IFPBBa_K256008 Version 1 (Component)Infrared Protein (IFP 1.4)
BBa_C2007BBa_C2007 Version 1 (Component)Zif268-GCN4.MalE
BBa_K1344005BBa_K1344005 Version 1 (Component)const.promoter-malS-HlyA
valSBO_32996 Version 1 (Component) ValSBO_26558 Version 1 (Component) BBa_K1537015BBa_K1537015 Version 1 (Component)35S promoter+translation initiation optimized sequence for dicot+Mass translation enhancer
BBa_K1344004BBa_K1344004 Version 1 (Component)malS-HlyA (with RBS)
MalLBO_26754 Version 1 (Component) MalABO_26240 Version 1 (Component) MalKBO_26707 Version 1 (Component) malABO_28612 Version 1 (Component) valSBO_2953 Version 1 (Component) malPBO_28613 Version 1 (Component) malQBO_32158 Version 1 (Component) malABO_2828 Version 1 (Component) BBa_K523007BBa_K523007 Version 1 (Component)Plac + LacZ + malS (dubious version)
BBa_K1467104BBa_K1467104 Version 1 (Component)GoldenGate compatible MAS promoter
MLSBBa_K1119000 Version 1 (Component)Mitochondrial Leader Sequence in RFC10 standard
BBa_J03210BBa_J03210 Version 1 (Component)malE [Maltose-binding Protein]
BBa_K339004BBa_K339004 Version 1 (Component)MalE Generator
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K339000BBa_K339000 Version 1 (Component)Maltose Binding Protein (malE)
BBa_P2007BBa_P2007 Version 1 (Component)PoPS->Zif268-GCN4.MalE
BBa_K339002BBa_K339002 Version 1 (Component)malEΔSS
BBa_I732000BBa_I732000 Version 1 (Component)malE [Maltose-binding Protein]
BBa_K152009BBa_K152009 Version 1 (Component)Zea mays Actin1 Intron RNAi Production Tool
TnPBBa_J61023 Version 1 (Component)Tn5 Transposase [Tnp1-PN] (with PstI and NotI)
BBa_K1825002BBa_K1825002 Version 1 (Component)Zea Mays Ubiquitin Promoter
BBa_J16999BBa_J16999 Version 1 (Component)malE [Maltose-binding Protein]
BBa_J42047BBa_J42047 Version 1 (Component)malQ F recomb. plasmid
BBa_K641038BBa_K641038 Version 1 (Component)P(malK) - Stress Promoter