GFPGFP Version 1 (Unknown)Organism: Cryptococcus neoformans serotype A H99S
CnU6CnU6_terminator Version 1 (Unknown)Organism: Cryptococcus neoformans var. neoformans JEC21
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
BBa_B0010BBa_B0010 Version 1 (Component)T1 from E. coli rrnB
Codon Optimised Sequence Pullcodon_optimisation Version 1 (Activity)Used to indicate that a sequence was codon optimised after pulling from the source and before submission
BBa_B0015BBa_B0015 Version 1 (Component)double terminator (B0010-B0012)
GFPBBa_E0040 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
LacIBBa_R0010 Version 1 (Component)promoter (lacI regulated)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
p(tetR)BBa_R0040 Version 1 (Component)TetR repressible promoter
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
lacI+pLBBa_R0011 Version 1 (Component)Promoter (lacI regulated, lambda pL hybrid)
BBa_J23100BBa_J23100 Version 1 (Component)constitutive promoter family member
BBa_K1051006BBa_K1051006 Version 1 (Component)Saccharomycescerevisiae TBY-1 terminator with stopcodon
BBa_J23106BBa_J23106 Version 1 (Component)constitutive promoter family member
BBa_B0011BBa_B0011 Version 1 (Component)LuxICDABEG (+/-)
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
BBa_I13453BBa_I13453 Version 1 (Component)Pbad promoter
BBa_B1001BBa_B1001 Version 1 (Component)Terminator (artifical, small, %T~=90)
pT7BBa_I719005 Version 1 (Component)T7 Promoter
BBa_K1051008BBa_K1051008 Version 1 (Component)S. cerevisiae CAA terminator with stopcodon
Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
BBa_K1051053BBa_K1051053 Version 1 (Component)K1051001 (non stop codon ECFP + K1051006 (Stop codon + TBY-1 terminator)
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_J23119BBa_J23119 Version 1 (Component)constitutive promoter family member
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
lux pRBBa_R0062 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pR)
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
cI lamBBa_R0051 Version 1 (Component)promoter (lambda cI regulated)
BBa_J23101BBa_J23101 Version 1 (Component)constitutive promoter family member
P(Lac) IQBBa_I14032 Version 1 (Component)promoter P(Lac) IQ
BBa_K1051350BBa_K1051350 Version 1 (Component)K1051300 (cln2 promoter) + K1051000 (non stop codon RFP) + K1051008 (Stop codon + CAA terminator)
cI+luxRBBa_R0065 Version 1 (Component)Promoter (lambda cI and luxR regulated -- hybrid)
BBa_K1051351BBa_K1051351 Version 1 (Component)K1051301 (clb2 promoter) + K1051000 (non stop codon RFP) + K1051008 (Stop codon + CAA terminator)
BBa_K1051307BBa_K1051307 Version 1 (Component)k1051304(cln3 promoter)+k1051062(K1051004 (non stop codon morange) + K1051006 (Stop codon +TBY-1term
BBa_K1051354BBa_K1051354 Version 1 (Component)K1051304 (cln3 promoter) + K1051000 (non stop codon RFP) + K1051008 (Stop codon + CAA terminator)
BBa_K1051002BBa_K1051002 Version 1 (Component)Stop codon free EYFP in RFC[23] standard
GFP reportBBa_E0240 Version 1 (Component)GFP generator
BBa_K1051360BBa_K1051360 Version 1 (Component)K1051300(cln2 promoter) + K1051002 (non stop codon EYFP) + K1051008 (Stop codon + CAA terminator)