Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

Direct Sequence Pull
direct Version 1 (Activity)
Used to indicate that a sequence was pulled directly from a source with no alterations made

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

Codon Optimised Sequence Pull
codon_optimisation Version 1 (Activity)
Used to indicate that a sequence was codon optimised after pulling from the source and before submission

Amp Cas
BBa_I13800 Version 1 (Component)
Ampicillin Resistance Cassette

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Truncated Sequence Pull
Truncated Version 1 (Activity)
Used to indicate that a sequence was truncated after pulling from the source and before submission

Las CIO
BBa_I14016 Version 1 (Component)
P(Las) CIO

GC Optimised Sequence Pull
GC_Optimised Version 1 (Activity)
Used to indicate that a sequence was GC optimised after pulling from the source and before submission

BBa_P10004
BBa_P10004 Version 1 (Component)
Mas

las TetO
BBa_I14015 Version 1 (Component)
P(Las) TetO

BBa_K1375024
BBa_K1375024 Version 1 (Component)
Prhl/las +RBS

BBa_K748002
BBa_K748002 Version 1 (Component)
Truncated lysostaphin coding sequence. Lysostaphin has has a specific lytic action against S.aureus.

BBa_I750016
BBa_I750016 Version 1 (Component)
Gas Vesicle polycistonic gene

BBa_K511003
BBa_K511003 Version 1 (Component)
UAS-Gal4 Promoter MammoBlock

BBa_K1362055
BBa_K1362055 Version 1 (Component)
MinD MTS as RFC[105] C-terminal insert

BBa_K1422501
BBa_K1422501 Version 1 (Component)
Zea mays nicotianamine synthase (corn NAS)

BBa_K1467104
BBa_K1467104 Version 1 (Component)
GoldenGate compatible MAS promoter

BBa_J28032
BBa_J28032 Version 1 (Component)
las autoinducer

BBa_K1422503
BBa_K1422503 Version 1 (Component)
Zea mays deoxymugineic acid synthase (corn DMAS)

BBa_K523003
BBa_K523003 Version 1 (Component)
malS for BioSandwich

BBa_K1399013
BBa_K1399013 Version 1 (Component)
Plac-RFP(DAS)

MAO
BBa_K1618001 Version 1 (Component)
MAO without inducible promoter

BBa_K523006
BBa_K523006 Version 1 (Component)
Plac + LacZ + malS

BBa_K1399007
BBa_K1399007 Version 1 (Component)
GFP (mut3b) with SsrA-DAS+2 degradation tag

BBa_K2128000
BBa_K2128000 Version 1 (Component)
MAHS

MTS
BBa_K678025 Version 1 (Component)
Mitochondrial targeting sequence for Aspergillus nidulans

ssrA(DAS+4
BBa_K1075020 Version 1 (Component)
E. coli ssrA(DAS+4)

MTS
BBa_K1362255 Version 1 (Component)
MinD MTS tag

BBa_K545006
BBa_K545006 Version 1 (Component)
mag

BBa_K1399008
BBa_K1399008 Version 1 (Component)
GFP (mut3b) with DAS-ssrA degradation tag

BBa_K523001
BBa_K523001 Version 1 (Component)
RBS + malS (E. coli periplasmic α-amylase)

pMam
BBa_K678023 Version 1 (Component)
Plasmid-Mam for Plug

BBa_K811005
BBa_K811005 Version 1 (Component)
INPNC-MCS

MBS
BBa_J26002 Version 1 (Component)
Mario Binding Site

BBa_K1375019
BBa_K1375019 Version 1 (Component)
Prhl/las +RBS+eforRed

BBa_K1375020
BBa_K1375020 Version 1 (Component)
Prhl/las +RBS+amilGFP