SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
CatBBa_I14033 Version 1 (Component)P(Cat)
CmRBBa_J31005 Version 1 (Component)chloramphenicol acetyltransferase (forwards, CmF) [cf. BBa_J31004]
CATBBa_C0100 Version 1 (Component)Enzyme, chloramphenicol acetyltransferase or CAT
BBa_K322210BBa_K322210 Version 1 (Component)Chloramphenicol acetyltransferase (cat)
BBa_K823020BBa_K823020 Version 1 (Component)chloramphenicol acetyltransferase (cat)
CmRBBa_J61000 Version 1 (Component)chloramphenicol resistance cassette
cmRBBa_P1004 Version 1 (Component)chloramphenicol resistance cassette
M256I CysEBBa_K731010 Version 1 (Component)M256I CysE (Serine Acetyltransferase)
BBa_K1673409BBa_K1673409 Version 1 (Component)Chloramphenicol Acetyltransferase??(Mutation Optimized)
ATF1BBa_J45014 Version 1 (Component)alcohol acetyltransferase I; converts isoamyl alcohol to isoamyl acetate (banana odor)
WT CysEBBa_K731000 Version 1 (Component)CysE (Serine Acetyltransferase)
CmR BackwaBBa_J31004 Version 1 (Component)chloramphenicol acetyltransferase (backwards, CmB) [cf. BBa_J31005]
BBa_J70026BBa_J70026 Version 1 (Component)cat cassette (chloramphenicol resistance)
BioplasticBBa_K156012 Version 1 (Component)phaA (acetyl-CoA acetyltransferase)
CmR-TBBa_K143064 Version 1 (Component)Chloramphenicol resistance protein - Terminator
BBa_K1051008BBa_K1051008 Version 1 (Component)S. cerevisiae CAA terminator with stopcodon
KatBBa_I14034 Version 1 (Component)P(Kat)
BBa_K156011BBa_K156011 Version 1 (Component)aadA (streptomycin 3'-adenyltransferase)
CmsRNABBa_K1960102 Version 1 (Component)sRNA, which can silence chloramphenicol resistance
cmRBBa_P1000 Version 1 (Component)chloramphenicol resistance cassette
BBa_K150002BBa_K150002 Version 1 (Component)Chloramphenicol resistance
CmRBBa_K300999 Version 1 (Component)chloramphenicol resistance cassette (rev)
BBa_K1956041BBa_K1956041 Version 1 (Component)gRNA for Chloramphenicol gene
BBa_K1956042BBa_K1956042 Version 1 (Component)gRNA for Chloramphenicol gene
ATF1BBa_J45006 Version 1 (Component)alcohol acetyltransferase I (ATF1)
BBa_K1015009BBa_K1015009 Version 1 (Component)Chloramphenicol resistance gene+FRT
BBa_M11011BBa_M11011 Version 1 (Component)Chloramphenicol Resistance Protein
BBa_M36915BBa_M36915 Version 1 (Component)Codes for the benzylalcohol acetyltransferase (BEAT) enzyme
BBa_K106012BBa_K106012 Version 1 (Component)Sas2 histone acetyltransferase, Aar1 BD part
BBa_K106011BBa_K106011 Version 1 (Component)Sas2 histone acetyltransferase, Aar1 AB part
BBa_K106013BBa_K106013 Version 1 (Component)Esa1 histone acetyltransferase, Aar1 BD part
BBa_K1023008BBa_K1023008 Version 1 (Component)Malonyl-CoA:ACP acyltransferase
BBa_K1403012BBa_K1403012 Version 1 (Component)Alcohol acetyltransferase I (ATF1) expression cassette
pSB6C5pSB6C5 Version 1 (Component)pBR322 Derived Chloramphenicol Backbone
BBa_K150003BBa_K150003 Version 1 (Component)Chloramphenicol resistance cassette
Tat PROMBBa_K895000 Version 1 (Component)Eco_Ptat2
mdnDBBa_K627004 Version 1 (Component)N-acetyltransferase from the mdn-cluster
BBa_I13457BBa_I13457 Version 1 (Component)Improved insertion site with two RNAse E cut sites
BBa_I711014BBa_I711014 Version 1 (Component)Acetyl-CoA acetyltransferase (Thiolase) from Clostridium acetobutylicum ATCC 824
BBa_K187020BBa_K187020 Version 1 (Component)Chloramphenicol resistance in pBA, Biobytes plasmid
BBa_J72002BBa_J72002 Version 1 (Component){CmR} Chloramphenicol resistance gene in BBb
mdnEDBBa_K627000 Version 1 (Component)ABC transporter and N-acetyltransferase from mdn-cluster
BBa_K737023BBa_K737023 Version 1 (Component)Promoter that can be induced by phosphate.