Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_K1336005BBa_K1336005 Version 1 (Component)Antisense for octaprenyl diphosphate synthase (ispB gene)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
GerEBO_11469 Version 1 (Component) mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
FurBO_11498 Version 1 (Component) hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
lasIBBa_C0178 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa (no LVA)
BBa_K727005BBa_K727005 Version 1 (Component)Geranyl diphosphate Synthase
dxsBBa_K118000 Version 1 (Component)dxs coding sequence encoding 1-deoxyxylulose-5-phosphate synthase
cinIBBa_C0076 Version 1 (Component)autoinducer synthetase
BBa_K649400BBa_K649400 Version 1 (Component)isoprene synthase (ispS)
BBa_K118002BBa_K118002 Version 1 (Component)crtB coding sequence encoding phytoene synthase
BBa_K249002BBa_K249002 Version 1 (Component)Lumazine Synthase
rbs+LIMS1BBa_I742111 Version 1 (Component)Limonene synthase gene with ribosome binding site
BBa_K1088004BBa_K1088004 Version 1 (Component)IspG (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase)
BBa_K649303BBa_K649303 Version 1 (Component)PlacIQ-RBS-ispS
BBa_J70029BBa_J70029 Version 1 (Component)RBS + mCherry gene, optimized for expression in Me. florum and E. coli
BBa_I742151BBa_I742151 Version 1 (Component)crtE (geranylgeranyl pyrophosphate synthase) coding sequence.
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K1033103BBa_K1033103 Version 1 (Component)geranyl diphosphate synthase
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
BBa_K118004BBa_K118004 Version 1 (Component)rbs+dxs (1-deoxyxylulose-5-phosphate synthase)
BBa_K531006BBa_K531006 Version 1 (Component)Optimized esp gene for <i>C. crescentus</i>
BBa_K2149000BBa_K2149000 Version 1 (Component)crtE (geranylgeranyl diphosphate synthase)
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K1484215BBa_K1484215 Version 1 (Component)nopaline synthase terminator
BBa_K1653002BBa_K1653002 Version 1 (Component)idi( isopentenyl-diphosphate delta-isomerase)
BBa_K249003BBa_K249003 Version 1 (Component)Lumazine Synthase
antisenseBBa_K238005 Version 1 (Component)Anti sense key
DspBBBa_K1659200 Version 1 (Component)Dispersin B, an antibiofilm enzyme that specifically hydrolyses PGA polymers
BBa_J22101BBa_J22101 Version 1 (Component)Lac Y gene
BBa_K531004BBa_K531004 Version 1 (Component)dspB from Actinobacillus actinomycetemcomitansis optimized for Caulobacter crescentus
BBa_K1033100BBa_K1033100 Version 1 (Component)geranylgeranyl diphosphate synthase (B0034-CrtE)
mCherryBBa_J06505 Version 1 (Component)monomeric RFP optimized for bacteria