Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
LacIBBa_R0010 Version 1 (Component)promoter (lacI regulated)
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
p(tetR)BBa_R0040 Version 1 (Component)TetR repressible promoter
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
lacI+pLBBa_R0011 Version 1 (Component)Promoter (lacI regulated, lambda pL hybrid)
BBa_J23100BBa_J23100 Version 1 (Component)constitutive promoter family member
BBa_J13002BBa_J13002 Version 1 (Component)TetR repressed POPS/RIPS generator
BBa_J23106BBa_J23106 Version 1 (Component)constitutive promoter family member
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_I13453BBa_I13453 Version 1 (Component)Pbad promoter
pT7BBa_I719005 Version 1 (Component)T7 Promoter
BBa_J23119BBa_J23119 Version 1 (Component)constitutive promoter family member
lux pRBBa_R0062 Version 1 (Component)Promoter (luxR & HSL regulated -- lux pR)
cI lamBBa_R0051 Version 1 (Component)promoter (lambda cI regulated)
BBa_J23101BBa_J23101 Version 1 (Component)constitutive promoter family member
P(Lac) IQBBa_I14032 Version 1 (Component)promoter P(Lac) IQ
cI+luxRBBa_R0065 Version 1 (Component)Promoter (lambda cI and luxR regulated -- hybrid)
BBa_I712074BBa_I712074 Version 1 (Component)T7 promoter (strong promoter from T7 bacteriophage)
OmpRBBa_R0082 Version 1 (Component)Promoter (OmpR, positive)
BBa_F2620BBa_F2620 Version 1 (Component)3OC<sub>6</sub>HSL -> PoPS Receiver
BBa_I712004BBa_I712004 Version 1 (Component)CMV promoter
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_I13001BBa_I13001 Version 1 (Component)RBS B0030 w/ YFP (-LVA) TT
BBa_J23114BBa_J23114 Version 1 (Component)constitutive promoter family member
BBa_J23102BBa_J23102 Version 1 (Component)constitutive promoter family member
BBa_J23110BBa_J23110 Version 1 (Component)constitutive promoter family member
BBa_I13002BBa_I13002 Version 1 (Component)RBS B0031 w/ YFP (-LVA) TT
BBa_J23104BBa_J23104 Version 1 (Component)constitutive promoter family member
BBa_I13003BBa_I13003 Version 1 (Component)medium RBS, YFP (-LVA), double terminator
Prm +BBa_I12007 Version 1 (Component)Modified lambda Prm promoter (OR-3 obliterated)
AraCBBa_R0080 Version 1 (Component)Promoter (AraC regulated)
BBa_J23113BBa_J23113 Version 1 (Component)constitutive promoter family member
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
BBa_M1003BBa_M1003 Version 1 (Component)HlyB membrane protein
BBa_J23105BBa_J23105 Version 1 (Component)constitutive promoter family member
BBa_I13023BBa_I13023 Version 1 (Component)QPI Test Construct Intermediate (Q01400.E0430)
LasR+PAIBBa_R0079 Version 1 (Component)Promoter (LasR & PAI regulated)
mRFP1BBa_I13503 Version 1 (Component)Screening plasmid intermediate
BBa_M13003BBa_M13003 Version 1 (Component)M13K07 gene III
BBa_M13009BBa_M13009 Version 1 (Component)M13K07 gene IX
BBa_M13007BBa_M13007 Version 1 (Component)M13K07 gene VII
BBa_M13503BBa_M13503 Version 1 (Component)M13K07 gene III RBS
Prm +BBa_I12006 Version 1 (Component)Modified lamdba Prm promoter (repressed by 434 cI)
BBa_M13008BBa_M13008 Version 1 (Component)M13KO7 gene VIII
BBa_M13103BBa_M13103 Version 1 (Component)M13K07 gene III promoter
BBa_I13013BBa_I13013 Version 1 (Component)RBS Test R0040.B0032.E0130
pT7BBa_K525998 Version 1 (Component)Promoter T7 and RBS