Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_K1906005BBa_K1906005 Version 1 (Component)Beta-subunit of Qbeta replicase holoenzyme
LacZBBa_I732005 Version 1 (Component)lacZ (encoding beta-galactosidase, full-length)
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
tetA(C)fBBa_J31007 Version 1 (Component)tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
rbs+crtZBBa_I742158 Version 1 (Component)crtZ (beta-carotene hydroxylase) with native rbs
tetA(C)bBBa_J31006 Version 1 (Component)tetracycline resistance protein TetA(C) (backwards) [cf. BBa_J31007]
Kust2860BBa_K1952001 Version 1 (Component)Hydrazine Synthase beta subunit
BBa_K1189008BBa_K1189008 Version 1 (Component)Beta-Lactamase
BBa_K517003BBa_K517003 Version 1 (Component)beta-pinene synthase
betaBBa_K1716000 Version 1 (Component)Lambda Beta recombinase optimized for expression in B. subtilis
BBa_K209406BBa_K209406 Version 1 (Component)AarI C-D part, Beta Pix
BBa_K1189009BBa_K1189009 Version 1 (Component)Beta-lactamase with His Tag
BBa_K553020BBa_K553020 Version 1 (Component)Mammaliam Secreted Beta Lactamase
BBa_K103012BBa_K103012 Version 1 (Component)TEM1 beta-lactamase subunit omega with linker
BBa_I742157BBa_I742157 Version 1 (Component)crtZ (beta-carotene hydroxylase) coding sequence
BBa_K2091001BBa_K2091001 Version 1 (Component)Protocatechuate 3,4-dioxygenase Beta Subunit
betABBa_K847040 Version 1 (Component)''Escherichia coli'' choline dehydrogenase (betA)
BBa_K1796102BBa_K1796102 Version 1 (Component)A chain of CODH/ACS beta subunit
BBa_K103008BBa_K103008 Version 1 (Component)TEM-1 beta-lactamase subunit alpha with linker
BBa_I712021BBa_I712021 Version 1 (Component)Interferon beta
BBa_K392008BBa_K392008 Version 1 (Component)C. firmi beta-glucosidase (Silver standard compatible)
BBa_K1952004BBa_K1952004 Version 1 (Component)Hydrazine Synthase subunit beta (Kust-2860) with strong RBS
UidABBa_K902000 Version 1 (Component)Beta-glucuronidase (uidA)
BBa_K891003BBa_K891003 Version 1 (Component)Omega Fragment of beta galactosidase
BBa_M36718BBa_M36718 Version 1 (Component)mmoY (methane monooxygenase subunit A, beta chain)
BBa_K398401BBa_K398401 Version 1 (Component)Prefoldin subunit beta Pyrococcus horikoshii OT3
BBa_K173004BBa_K173004 Version 1 (Component)Beta-galactosidase protein generator
beta-galacBBa_K823019 Version 1 (Component)LacZ (RBS+Freiburg standard)
tetABBa_P1005 Version 1 (Component)tetracycline resistance cassette
BBa_K572009BBa_K572009 Version 1 (Component)Mouse Beta Carotene Dioxygenase
hCG-βBBa_K732000 Version 1 (Component)Human Chorionic Gonadotropin, Beta Subunit (hCG-β)
BBa_K1650010BBa_K1650010 Version 1 (Component)Biosynthesis of beta-carotene
BBa_K1499501BBa_K1499501 Version 1 (Component)Endo-1,4-beta-glucanase (cellulase gene)