SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

BBa_K2066018
BBa_K2066018 Version 1 (Component)
UNS 2 Sequence, from Torella et al., 2013

BBa_J52008
BBa_J52008 Version 1 (Component)
luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)

BBa_J100144
BBa_J100144 Version 1 (Component)
Caffeine Riboswitch 2

BBa_J100160
BBa_J100160 Version 1 (Component)
Caffeine Riboswitch 3

BBa_J100147
BBa_J100147 Version 1 (Component)
Caffeine Riboswitch 5

BBa_J100150
BBa_J100150 Version 1 (Component)
Caffeine Riboswitch 8

BBa_J100157
BBa_J100157 Version 1 (Component)
Caffeine Riboswitch 15

BBa_J100145
BBa_J100145 Version 1 (Component)
Caffeine Riboswitch 3

BBa_J100151
BBa_J100151 Version 1 (Component)
Caffeine Riboswitch 9

BBa_J100152
BBa_J100152 Version 1 (Component)
Caffeine Riboswitch 10

BBa_J100155
BBa_J100155 Version 1 (Component)
Caffeine Riboswitch 13

BBa_J100149
BBa_J100149 Version 1 (Component)
Caffeine Riboswitch 7

BBa_J100156
BBa_J100156 Version 1 (Component)
Caffeine Riboswitch 14

BBa_J100148
BBa_J100148 Version 1 (Component)
Caffeine Riboswitch 6

BBa_J100159
BBa_J100159 Version 1 (Component)
Caffeine Riboswitch 17

BBa_J100154
BBa_J100154 Version 1 (Component)
Caffeine Riboswitch 12

BBa_J100146
BBa_J100146 Version 1 (Component)
Caffeine Riboswitch 4

BBa_J100153
BBa_J100153 Version 1 (Component)
Caffeine Riboswitch 11

BBa_J100158
BBa_J100158 Version 1 (Component)
Caffeine Riboswitch 16

BBa_K738002
BBa_K738002 Version 1 (Component)
Theophyline riboswitch regulated RNA Scaffold (clover vision 2)

BBa_K902023
BBa_K902023 Version 1 (Component)
Moco Riboswitch

BBa_J100223
BBa_J100223 Version 1 (Component)
Caffeine Aptamer with RS3, riboswitch in tCloneRed

SYFP2
BBa_K864100 Version 1 (Component)
Super Yellow Fluorescent Protein 2 (SYFP2)

thRS2-V
BBa_K537004 Version 1 (Component)
Theophylline Riboswitch 2-Venus

BBa_J100138
BBa_J100138 Version 1 (Component)
Theophylline Riboswitch 2

thRS2-ChZ
BBa_K537002 Version 1 (Component)
Theophylline Riboswitch 2-CheZ

BBa_K784005
BBa_K784005 Version 1 (Component)
Theophylline riboswitch 12.1

BBa_K1114107
BBa_K1114107 Version 1 (Component)
Bicistronic Design RBS 2, MoClo Format with BC fusion sites

Riboswitch
BBa_J04700 Version 1 (Component)
Part containing promoter, riboswitch mTCT8-4 theophylline aptamer (J04705), and RBS

Riboswitch
BBa_J04900 Version 1 (Component)
Part containing promoter, 8 bp, RBS, and riboswitch mTCT8-4 theophylline aptamer (J04705)

Riboswitch
BBa_J04800 Version 1 (Component)
J04800 (RevAptRibo) contains a theophylline aptamer upstream of the RBS that should act as a riboswi

BBa_K902008
BBa_K902008 Version 1 (Component)
MgtA riboswitch

BBa_K911003
BBa_K911003 Version 1 (Component)
Fluoride Sensitive Riboswitch

BBa_K117002
BBa_K117002 Version 1 (Component)
LsrA promoter (indirectly activated by AI-2)

BBa_K1434001
BBa_K1434001 Version 1 (Component)
glmS riboswitch

BBa_K784006
BBa_K784006 Version 1 (Component)
Theophylline riboswitch 12.1 + mCherry

BBa_K1763442
BBa_K1763442 Version 1 (Component)
MaSp1/2[1:2]-12(1C3)

BBa_K1763438
BBa_K1763438 Version 1 (Component)
MaSp1/2[2:1]-12(1C3)

BBa_K1486020
BBa_K1486020 Version 1 (Component)
rLuc[2]

BBa_K517005
BBa_K517005 Version 1 (Component)
erg20-2

BBa_I752000
BBa_I752000 Version 1 (Component)
Riboswitch(theophylline)

BBa_K1520002
BBa_K1520002 Version 1 (Component)
Riboswitch MC31

BBa_K784013
BBa_K784013 Version 1 (Component)
pLux+Theophylline riboswitch+mCherry

BBa_K734000
BBa_K734000 Version 1 (Component)
Caffeine demethylation pathway

BBa_K079019
BBa_K079019 Version 1 (Component)
Lac 2 - operator library member

BBa_K1520001
BBa_K1520001 Version 1 (Component)
Riboswitch MC7

BBa_K1627006
BBa_K1627006 Version 1 (Component)
Device to demethylate caffeine