Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
BBa_K1321340BBa_K1321340 Version 1 (Component)Double CBD (dCBD) with N-terminal linker
AbrBBO_9091 Version 1 (Component) BBa_K626008BBa_K626008 Version 1 (Component)DBD designed for RARE in ADRB - EcR LBD
BBa_K626009BBa_K626009 Version 1 (Component)DBD designed for RARE in CD38 - EcR LBD
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K1462501BBa_K1462501 Version 1 (Component)GBD domian + Linker
FurBO_11498 Version 1 (Component) BBa_K364309BBa_K364309 Version 1 (Component)Human ER LBD
lexA DBDBBa_K165009 Version 1 (Component)LexA DNA-binding domain
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K364203BBa_K364203 Version 1 (Component)DBD designed for RARE in ADRP1
BBa_K364204BBa_K364204 Version 1 (Component)DBD designed for RARE in CD38
BBa_K364329BBa_K364329 Version 1 (Component)ER DBD-VDR hinge-ER LBD
IBMc318IBMc318 Version 1 (Component)pSB1A3-BbsI-G-ER-LBD-S-SapI
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_K909008BBa_K909008 Version 1 (Component)tetR-DBD-UVR8 fusion protein
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K364307BBa_K364307 Version 1 (Component)Human ER DBD
Kozak & stBBa_J63003 Version 1 (Component)designed yeast Kozak sequence
BBa_K364308BBa_K364308 Version 1 (Component)Human PXR LBD
BBa_J52008BBa_J52008 Version 1 (Component)luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)
BBa_K209020BBa_K209020 Version 1 (Component)Aar1 A-B part, RBD (Dictyostelium discoideum)
CBDBBa_K1830003 Version 1 (Component)CBD
BBa_K309020BBa_K309020 Version 1 (Component)eCFP (for use in C. elegans chassis)
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
BBa_K364001BBa_K364001 Version 1 (Component)Human VDR DBD
BBa_K1321005BBa_K1321005 Version 1 (Component)Synthetic Phytochelatin EC(20) RFC[25]
BBa_K364305BBa_K364305 Version 1 (Component)HUMAN CAR DBD
BBa_K364201BBa_K364201 Version 1 (Component)Human RXR DBD
BBa_K364306BBa_K364306 Version 1 (Component)Human CAR LBD