Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
GFP reportBBa_E0240 Version 1 (Component)GFP generator
GFP generaBBa_E0840 Version 1 (Component)GFP generator
LuxRBBa_I0462 Version 1 (Component)luxR Protein Generator
BBa_K792009BBa_K792009 Version 1 (Component)Yeast exportable His-rich peptide w/enhanced import (1)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_K792014BBa_K792014 Version 1 (Component)Exportable His-rich peptide generator
CD4 signalBBa_I712009 Version 1 (Component)CD4 signal peptide; localizes to plasma membrane
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
BBa_J13002BBa_J13002 Version 1 (Component)TetR repressed POPS/RIPS generator
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_K081014BBa_K081014 Version 1 (Component)RFP protein generator - PoPS->RFP
HisTagBBa_K792005 Version 1 (Component)Histidine rich peptide (His Tag)
BBa_K792011BBa_K792011 Version 1 (Component)Yeast exportable His-rich peptide w/enhanced import (2)
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_K792010BBa_K792010 Version 1 (Component)Yeast exportable Trp-rich peptide w/enhanced import (1)
BBa_K792012BBa_K792012 Version 1 (Component)Yeast exportable Trp-rich peptide w/enhanced import (2)
HinBBa_J31000 Version 1 (Component)DNA-invertase Hin from Salmonella typhimurium
HisBBa_K157011 Version 1 (Component)His affinity tag; Freiburg standard
TrpZipper2BBa_K792006 Version 1 (Component)Tryptophan rich peptide (TrpZipper2)
PolyHbBBa_K792007 Version 1 (Component)Histidine rich peptide (PolyHb)
PolyWbBBa_K792008 Version 1 (Component)Tryptophan rich peptide (PolyWb)
REBBa_J3101 Version 1 (Component)Recombinational Enhancer (RE) for Hin/Hix inverting
BBa_J36835BBa_J36835 Version 1 (Component)Lipoprotein signal peptide
BBa_B0053BBa_B0053 Version 1 (Component)Terminator (His)
BBa_I0466BBa_I0466 Version 1 (Component)RhlR Protein Generator
SPzim17BBa_K809201 Version 1 (Component)signal peptide of ZIM17
BBa_K1404007BBa_K1404007 Version 1 (Component)p70-CsgA-His, His-tagged curli generator
His-ScaffoBBa_K1602027 Version 1 (Component)Protein scaffold with N-terminal HisTag
BBa_K1404008BBa_K1404008 Version 1 (Component)p70-CsgA-His*2, double His-tagged curli generator
BBa_K516022BBa_K516022 Version 1 (Component)AiiA protein generator TERM+ RBS+(B0032)
BBa_K554002BBa_K554002 Version 1 (Component)HlyA secretion signal peptide
BBa_K1151001BBa_K1151001 Version 1 (Component)Histidine-rich metal-binding protein
BBa_I1466BBa_I1466 Version 1 (Component)RhlR protein generator (LVA-)
HIC generaBBa_K1602020 Version 1 (Component)Inducible generator of Humicola insolens cutinase (HIC) with N-terminal His-Tag
BBa_K081012BBa_K081012 Version 1 (Component)GFP protein generator - PoPS->GFP
BBa_K145201BBa_K145201 Version 1 (Component)INPUT TetR generator
BBa_M36709BBa_M36709 Version 1 (Component)Gemini Protein Generator
BBa_J37019BBa_J37019 Version 1 (Component)AHL induced LuxR generator
BBa_K792000BBa_K792000 Version 1 (Component)Yeast exportable His-rich peptide w/enhanced import (nonStd)
BBa_K1723005BBa_K1723005 Version 1 (Component)PAM rich URS J23117Alt promoter
BBa_K081016BBa_K081016 Version 1 (Component)lasI protein generator - PoPS->lasI
eGFP+HisBBa_K193202 Version 1 (Component)EGFP(enhanced Green Fluorescent Protein) with His tag