Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
GerEBO_11469 Version 1 (Component) mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
FurBO_11498 Version 1 (Component) BBa_K314103BBa_K314103 Version 1 (Component)Lac induced expression cassette
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K531006BBa_K531006 Version 1 (Component)Optimized esp gene for <i>C. crescentus</i>
BBa_K786003BBa_K786003 Version 1 (Component)Sensory rhodopsin I (SRI) with HtrII & Tar, sensitive to orange light
BBa_J70029BBa_J70029 Version 1 (Component)RBS + mCherry gene, optimized for expression in Me. florum and E. coli
BBa_K786010BBa_K786010 Version 1 (Component)Gene expression for sensory rhodopsin I & II (SRI & SRII)
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_K1321338BBa_K1321338 Version 1 (Component)T7 Expression vector
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K786005BBa_K786005 Version 1 (Component)Light triggering gene expression with sensory rhodopsin I & II (SRI & SRII)
BBa_K786002BBa_K786002 Version 1 (Component)Sensory rhodopsin II (SRII) with HtrII & Tar, sensitive to blue-green light
BBa_K861042BBa_K861042 Version 1 (Component)FadA, gene for fatty acid degradation from <i>Salmonella enterica</i> LT2
BBa_K314100BBa_K314100 Version 1 (Component)High constitutive expression cassette
BBa_K1813015BBa_K1813015 Version 1 (Component)<i>nicD</i> Expression Casette
BBa_K861031BBa_K861031 Version 1 (Component)FadJ, gene for fatty acid degradation from <i>E.coli str. K12</i>
BBa_K1813054BBa_K1813054 Version 1 (Component)pelB <i>AgCPR</i> Expression Cassette
BBa_K1315005BBa_K1315005 Version 1 (Component)The <i>clp</i> gene from <i>Xanthomonas campestris</i>
BBa_K1315003BBa_K1315003 Version 1 (Component)The <i>rpfG</i> gene from <i>Xanthomonas campestris</i>
BBa_I739001BBa_I739001 Version 1 (Component)Constitutive expression cassette for TetR +LVA (J23100.B0034.C0040.B0015)
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
BBa_K861090BBa_K861090 Version 1 (Component)YhjH Gene From <i>E.coli str. K12</i>
BBa_K1813001BBa_K1813001 Version 1 (Component)<i>cch2</i> Expression Cassette
BBa_K1813030BBa_K1813030 Version 1 (Component)<i>nicX<i> Expression Cassette
BBa_K1465301BBa_K1465301 Version 1 (Component)<i>adhA</i> gene from <i>Lactococcus lactis</i>
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K566023BBa_K566023 Version 1 (Component)pcyA gene (constitutive expression)
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
BBa_K1813014BBa_K1813014 Version 1 (Component)<i>nicC</i> Expression Cassette
BBa_K733010BBa_K733010 Version 1 (Component)<i>Ptms</i>+RBS+<i>ydcD</i>.
BBa_K1728020BBa_K1728020 Version 1 (Component)Rhodopsin signaling peptide (bovine)
BBa_K733013BBa_K733013 Version 1 (Component)<i>Pveg</i>+R.B.S.
BBa_K1813044BBa_K1813044 Version 1 (Component)<i>nicF and nicE</i> Expression Cassette
BBa_K733006BBa_K733006 Version 1 (Component)<i>ydjM</i>+<i>Bmp2</i>
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination