ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

Direct Sequence Pull
direct Version 1 (Activity)
Used to indicate that a sequence was pulled directly from a source with no alterations made

cI HK022
BBa_C0050 Version 1 (Component)
cI repressor from phage HK022 (+LVA?)

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

cI HK022
BBa_R0050 Version 1 (Component)
Promoter (HK022 cI regulated)

BBa_I11043
BBa_I11043 Version 1 (Component)
HK022 attP

P22 attP
BBa_I11033 Version 1 (Component)
P22 ''attP''

BBa_K329040
BBa_K329040 Version 1 (Component)
attP HK022 Mutant

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

BBa_K329039
BBa_K329039 Version 1 (Component)
attP HK022 Wild Type

BBa_K1433001
BBa_K1433001 Version 1 (Component)
attB-J23110-attP

BBa_I11042
BBa_I11042 Version 1 (Component)
HK022 attB rev comp

BBa_K2100049
BBa_K2100049 Version 1 (Component)
pENTR attB-flipped eYFP-attP (TP901)

cI HK022
BBa_R1050 Version 1 (Component)
Promoter, Standard (HK022 cI regulated) <br>

BBa_J99006
BBa_J99006 Version 1 (Component)
HK022 attL recombination site

BBa_J99007
BBa_J99007 Version 1 (Component)
HK022 attR recombination site

BBa_K617004
BBa_K617004 Version 1 (Component)
Lambda attP P'OP

BBa_K1433002
BBa_K1433002 Version 1 (Component)
attL-J23110-attR

attP
BBa_K1463040 Version 1 (Component)
PhiC31 attP site

P22 attB
BBa_I11032 Version 1 (Component)
P22 ''attB'', reverse complement

BBa_K2100071
BBa_K2100071 Version 1 (Component)
pEXPR hEF1a: attB-flipped eYFP-attP

BBa_K1433009
BBa_K1433009 Version 1 (Component)
attL-RTerminator-RTerminator-attR-B

BBa_K2116022
BBa_K2116022 Version 1 (Component)
Anderson Promoter J23118 flanked by tp901 attP and attB sites

BBa_K2116021
BBa_K2116021 Version 1 (Component)
Anderson promoter J23118 flanked by bxb1 attP and attB sites

BBa_K1660010
BBa_K1660010 Version 1 (Component)
RFP+RBS+attB+P+attP+RBS+GFP+Terminator

FlipFlop
BBa_K907002 Version 1 (Component)
Binary signal generator, RBS(reverse) - attB - Promoter - attP - RBS

BBa_K1433010
BBa_K1433010 Version 1 (Component)
J23110-attL-RTerminator-RTerminator-attR-B

BBa_K329010
BBa_K329010 Version 1 (Component)
RBS + Int HK022

BBa_K318014
BBa_K318014 Version 1 (Component)
pCons + attB + RBS + GFP + T + rRFP + rRBS + attP

BBa_K2116023
BBa_K2116023 Version 1 (Component)
Anderson promoter J23118 flanked by phiC31 attP and attB sites

BBa_B0034
BBa_B0034 Version 1 (Component)
RBS (Elowitz 1999) -- defines RBS efficiency

BBa_P0150
BBa_P0150 Version 1 (Component)
PoPS -> cI (HK022) [S0164]

BBa_K329011
BBa_K329011 Version 1 (Component)
RBS + Xis-Int HK022

Lambda att
BBa_I11023 Version 1 (Component)
Lambda attP

BBa_I11053
BBa_I11053 Version 1 (Component)
P21 attP

BBa_I11062
BBa_I11062 Version 1 (Component)
HK022 half bit

attB
BBa_K1463041 Version 1 (Component)
Reversed PhiC31 attB site

BBa_I11041
BBa_I11041 Version 1 (Component)
HK022 Xis +AAV

BBa_I11040
BBa_I11040 Version 1 (Component)
HK022 Int +LVA

FlipFlop
BBa_K907003 Version 1 (Component)
Binary signal generator, promoter reversed, RBS(reverse) - attB - Promoter(reverse) - attP - RBS

REINT-6N
BBa_K1433017 Version 1 (Component)
P-C-attL-rT-rT-attR-B-6N-gp35-T

REINT-B003
BBa_K1433016 Version 1 (Component)
P-C-attL-rT-rT-attR-B-B0031-gp35-T

BBa_M36430
BBa_M36430 Version 1 (Component)
Bxb1 attP - reverse

BBa_K329045
BBa_K329045 Version 1 (Component)
Right arm Tn916 - Mutant + Mutant HK022

BBa_K329050
BBa_K329050 Version 1 (Component)
Left arm Tn916 - Mutant + Mutant HK022

BBa_K132030
BBa_K132030 Version 1 (Component)
rfp+attp

phi80 attP
BBa_K300991 Version 1 (Component)
phi80 phage attP integration site