Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
BBa_K1957005BBa_K1957005 Version 1 (Component)HyaA subunit of NiFe Hydrogenase
BBa_K1957006BBa_K1957006 Version 1 (Component)HyaC subunit of NiFe Hydrogenase
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
BBa_K1957007BBa_K1957007 Version 1 (Component)HyaB C-terminally tagged subunit of NiFe Hydrogenase
BBa_K1957008BBa_K1957008 Version 1 (Component)HyaB N-terminally tagged subunit of NiFe Hydrogenase
BBa_K1957004BBa_K1957004 Version 1 (Component)HydA subunit of FeFe Hydrogenase
BBa_K118003BBa_K118003 Version 1 (Component)crtI coding sequence encoding phytoene dehydrogenase
BBa_K1957001BBa_K1957001 Version 1 (Component)HydC subunit of FeFe Hydrogenase
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K1957003BBa_K1957003 Version 1 (Component)HydB (N-terminally tagged) subunit of FeFe Hydrogenase
BBa_K1957002BBa_K1957002 Version 1 (Component)HydB (C-terminally tagged) subunit of FeFe Hydrogenase
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
RFP2BBa_I715023 Version 1 (Component)Carboxyl portion of RFP
BBa_K535002BBa_K535002 Version 1 (Component)HydA (hydrogenase I)-> Clostridium acetobutylicum ATCC 824
MorABBa_K1615000 Version 1 (Component)Morphine-6-dehydrogenase RFC25
BBa_I714031BBa_I714031 Version 1 (Component)OriT-R (Origin of Transfer for the R751-plasmid nic region)
leuBBBa_K594002 Version 1 (Component)subunit of a 3-isopropylmalate dehydrogenase from E.coli BL21
BBa_K730003BBa_K730003 Version 1 (Component)nifA; transcriptional regulator NifA; K02584 Nif-specific regulatory protein
RFP1BBa_I715022 Version 1 (Component)Amino Portion of RFP
tctA_505aaBBa_K808004 Version 1 (Component)tctA_505: large subunit A2 of the tripartite tricarboxylate transporter family
BLpBBa_K238013 Version 1 (Component)Exact promoter of the blue light receptor
BBa_I725014BBa_I725014 Version 1 (Component)Butyraldehyde dehydrogenase
BBa_K1321002BBa_K1321002 Version 1 (Component)Re-entry of BBa_K863111, Cellulose Binding Domain CBDclos in rfc25
tctA_503aaBBa_K808002 Version 1 (Component)tctA_503: large subunit A1 of the tripartite tricarboxylate transporter family
tctB_162aaBBa_K808003 Version 1 (Component)tctB_162: small subunit B1 of the tripartite tricarboxylate transporter family
BBa_K1638003BBa_K1638003 Version 1 (Component)T25 domain of <i>cyaA</i> from <i>Bordetella pertussis</i> (IPTG inducible)
yhaABO_32284 Version 1 (Component) GFP1BBa_I715019 Version 1 (Component)Amino Half of GFP (aka GFP1)
Bt-ALDHBBa_K398006 Version 1 (Component)Medium-Chain Aldehyde Dehydrogenase
3alpha-HSDBBa_K1674001 Version 1 (Component)3alpha-hydroxysteroid dehydrogenase
BBa_K1314014BBa_K1314014 Version 1 (Component)nifK-XhoI-nifH promoter T7 expression system(weak)