iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
BBa_I15009BBa_I15009 Version 1 (Component)phycocyanobilin:ferredoxin oxidoreductase (PcyA) from synechocystis
BBa_K535006BBa_K535006 Version 1 (Component)PFOR -> D. africanus Pyruvate-Ferredoxin OxidoReductase
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K209399BBa_K209399 Version 1 (Component)AarI A-D acceptor vector
BBa_K857001BBa_K857001 Version 1 (Component)NADH: Ferredoxin Oxidoreductase
spxBBBa_K137069 Version 1 (Component)Pyruvate oxidase (SpxB)
BBa_K1132011BBa_K1132011 Version 1 (Component)heme oxygenase (ho1) and ferredoxin oxidoreductase (PcyA)
BBa_K1132012BBa_K1132012 Version 1 (Component)heme oxygenase (ho1), ferredoxin oxidoreductase (PcyA) and tetracycline repressor (TetR)
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
"D"BBa_K1080002 Version 1 (Component)ChlD
BBa_K1132013BBa_K1132013 Version 1 (Component)heme oxygenase (ho1), ferredoxin oxidoreductase (PcyA) and tetracycline repressor (TetR) under const
BBa_K106017BBa_K106017 Version 1 (Component)AarI "D" site scar sequence
BBa_K554008BBa_K554008 Version 1 (Component)Hemolysin D - HlyD
PT7-DBBa_I716106 Version 1 (Component)T7 Promoter (Mutant D)
BBa_K1067004BBa_K1067004 Version 1 (Component)Hydroxylamine oxidoreductase
fdxBBa_K826011 Version 1 (Component)Ferredoxin
BBa_K1196004BBa_K1196004 Version 1 (Component)Hydrazine oxidoreductase
BBa_I766217BBa_I766217 Version 1 (Component)Stop-D-BamHI-Adh Terminator Adaptor
pdcBBa_K173016 Version 1 (Component)pyruvate decarboxylase from Z. mobilis (codon optimized for E. coli)
pchBABBa_J45017 Version 1 (Component)isochorismate pyruvate-lyase and isochorismate synthase (pchBA); converts chorismate to salicylate
BBa_K1998011BBa_K1998011 Version 1 (Component)Ferredoxin-FNR
BBa_M36923BBa_M36923 Version 1 (Component)Ferredoxin producing gene
BBa_K209406BBa_K209406 Version 1 (Component)AarI C-D part, Beta Pix
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
BBa_K1884006BBa_K1884006 Version 1 (Component)Ferredoxin-NADP(+)Reductase(FNR)
BBa_M36708BBa_M36708 Version 1 (Component)Pyruvate Sensor
BBa_K535003BBa_K535003 Version 1 (Component)FeOx -> Clostridium acetobutylicum???s ferredoxin
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_K209006BBa_K209006 Version 1 (Component)Aar1 C-D part, Dd5P2 (aa435-787)
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
pdcBBa_K273000 Version 1 (Component)Pyruvate decarboxylase (pdc) from <i>Z. Mobilis</i> ATCC 29191
BBa_K1104401BBa_K1104401 Version 1 (Component)pyruvate decarboxyase
BBa_M11041BBa_M11041 Version 1 (Component)pyruvate decarboxylase
BBa_K209404BBa_K209404 Version 1 (Component)AarI C-D part, ActA (30-612)
BBa_K209410BBa_K209410 Version 1 (Component)AarI C-D part, ActA (255-392)
BBa_K1196020BBa_K1196020 Version 1 (Component)hydrazine oxidoreductase device
Cytosine DBBa_J32019 Version 1 (Component)Cytosine Deaminase WSU
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
BBa_M36698BBa_M36698 Version 1 (Component)Pyruvate Sensor v2