SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

BBa_B0034
BBa_B0034 Version 1 (Component)
RBS (Elowitz 1999) -- defines RBS efficiency

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0030
BBa_B0030 Version 1 (Component)
RBS.1 (strong) -- modified from R. Weiss

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

BBa_K648013
BBa_K648013 Version 1 (Component)
GFP with Standard 25 Prefix/Suffix

BBa_J04500
BBa_J04500 Version 1 (Component)
IPTG inducible promoter with RBS

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

BBa_K121016
BBa_K121016 Version 1 (Component)
Tokyo Standard prefix suffix RBS

pT7
BBa_K525998 Version 1 (Component)
Promoter T7 and RBS

cI lam
BBa_R1051 Version 1 (Component)
Promoter, Standard (lambda cI regulated)<br>

T7 RBS
BBa_K1362090 Version 1 (Component)
strong T7 RBS

pSB1A2
BBa_K300988 Version 1 (Component)
pSB1A2 without Prefix and Suffix

RBS-RFP
BBa_K093005 Version 1 (Component)
RFP with RBS

BBa_K648012
BBa_K648012 Version 1 (Component)
LacZa wtih Standard 25 Prefix/Suffix

BBa_K1045010
BBa_K1045010 Version 1 (Component)
RBS BBa_B0034 with inversed Pre- and Suffix

BBa_K1051003
BBa_K1051003 Version 1 (Component)
Stop codon free GFP in RFC[23] standard

BBa_C0261
BBa_C0261 Version 1 (Component)
AHL-making Enzyme, luxI (+RBS)

BBa_K1321300
BBa_K1321300 Version 1 (Component)
pSEVA331-Bb - pSEVA331 with biobrick prefix and suffix

BBa_K648009
BBa_K648009 Version 1 (Component)
RecA Cleavage Site with Standard 25 Prefix/Suffix

BBa_K648008
BBa_K648008 Version 1 (Component)
TEV protease cleaveage site with Standard 25 Prefix/Suffix

RBS-spoVG
BBa_K143021 Version 1 (Component)
SpoVG ribosome binding site (RBS) for B. subtilis

BBa_K1051000
BBa_K1051000 Version 1 (Component)
Stop codon free RFP in RFC[23] standard

Prefix
BBa_G00000 Version 1 (Component)
BioBrick cloning site prefix

Suffix
BBa_G00001 Version 1 (Component)
BioBrick cloning site suffix

BBa_J44001
BBa_J44001 Version 1 (Component)
Reverse RBS (RBS_rev) -- corresponds to BBa_B0030

BBa_K648005
BBa_K648005 Version 1 (Component)
Short Fusion Protein Linker: GGSG with standard 25 prefix/suffix

BBa_K648006
BBa_K648006 Version 1 (Component)
Long 10AA Fusion Protein Linker with Standard 25 Prefix/Suffix

BBa_J54100
BBa_J54100 Version 1 (Component)
Prefix-Suffix(deltaP)

BBa_K371049
BBa_K371049 Version 1 (Component)
MPF(meta-prefix)

BBa_E0430
BBa_E0430 Version 1 (Component)
EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)

BBa_K1321339
BBa_K1321339 Version 1 (Component)
CBDcenA+Linker, RFC 25 standard

BBa_K648007
BBa_K648007 Version 1 (Component)
Medium 6AA Fusion Protein Linker: GGSGGS with Standard 25 Prefix/Suffix

BBa_K300005
BBa_K300005 Version 1 (Component)
GFP (Silver Standard Prefix) with terminator

RBS_cassette
RBS_cassette Version 1 (Component)
AvrII restriction site (cctagg), overlapped with RBS (aggagga)

BBa_K371050
BBa_K371050 Version 1 (Component)
MSF(meta-suffix)

eyfp
BBa_E0031 Version 1 (Component)
EYFP (RBS+ LVA-)

BBa_K165002
BBa_K165002 Version 1 (Component)
Kozak sequence (yeast RBS)

lux pR
BBa_R1062 Version 1 (Component)
Promoter, Standard (luxR and HSL regulated -- lux pR)<br>

BBa_I751001
BBa_I751001 Version 1 (Component)
pBR Biobrick-Tokyo Standard

BBa_J18974
BBa_J18974 Version 1 (Component)
Prefix/Suffix C

BBa_J18975
BBa_J18975 Version 1 (Component)
Prefix/Suffix D