iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
BBa_K314103BBa_K314103 Version 1 (Component)Lac induced expression cassette
GAL1BBa_J63006 Version 1 (Component)yeast GAL1 promoter
BBa_K801076BBa_K801076 Version 1 (Component)Yeast expression cassette for CaXMT1 and CaMXMT1
BBa_K314100BBa_K314100 Version 1 (Component)High constitutive expression cassette
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K801070BBa_K801070 Version 1 (Component)xanthosine methyltransferase CaXMT1-strep
BBa_K801074BBa_K801074 Version 1 (Component)CaMXMT1 expression cassette for yeast
BBa_K801073BBa_K801073 Version 1 (Component)CaXMT1 expression cassette for yeast
BBa_K801075BBa_K801075 Version 1 (Component)CaDXMT1 expression cassette for yeast
FurBO_11498 Version 1 (Component) BBa_K165002BBa_K165002 Version 1 (Component)Kozak sequence (yeast RBS)
BBa_K801071BBa_K801071 Version 1 (Component)7-methylxanthine N-methyltransferase CaMXMT1-strep
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K801072BBa_K801072 Version 1 (Component)3,7-dimethylxanthine N-methyltransferase CaDXMT1-strep
BBa_K801012BBa_K801012 Version 1 (Component)ADH1 yeast terminator
BBa_I739001BBa_I739001 Version 1 (Component)Constitutive expression cassette for TetR +LVA (J23100.B0034.C0040.B0015)
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
yfpBBa_K165005 Version 1 (Component)Venus YFP, yeast optimized for fusion
BBa_K165010BBa_K165010 Version 1 (Component)ADH1 yeast transcription terminator
kanRBBa_P1003 Version 1 (Component)kanamycin resistance cassette
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_K1321338BBa_K1321338 Version 1 (Component)T7 Expression vector
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
mCherryBBa_K165004 Version 1 (Component)mCherry, yeast optimized for fusion
pTEFBBa_K165037 Version 1 (Component)TEF2 yeast constitutive promoter
BBa_K392003BBa_K392003 Version 1 (Component)yeast ADH1 terminator
BBa_K1129014BBa_K1129014 Version 1 (Component)CaMXMT1 under pTET constitutive promoter
BBa_K1129016BBa_K1129016 Version 1 (Component)CaXMT1 under pTET constitutive promoter
BBa_K1129013BBa_K1129013 Version 1 (Component)CaXMT1 under arabinose-induced promoter
BBa_K1129015BBa_K1129015 Version 1 (Component)CaMXMT1 under arabinose-induced promoter
mCherryBBa_E2060 Version 1 (Component)derivative of mRFP1, yeast-optimized
BBa_K606017BBa_K606017 Version 1 (Component)T7 polymerase expression casette for Bacillus Subtilis
BBa_K801077BBa_K801077 Version 1 (Component)Caffeine Synthesis Pathway pTEF2-XMT1-tADH1-pTEF1-MXMT1-tADH1-pTEF2-DXMT1-tADH1
BBa_K530008BBa_K530008 Version 1 (Component)TDH3 Yeast Promoter
mRFP1BBa_E2050 Version 1 (Component)derivative of mRFP1, yeast-optimized
P0310BBa_J63005 Version 1 (Component)yeast ADH1 promoter