Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_K1440088BBa_K1440088 Version 1 (Component)long parts consist of part2 and part3
BBa_S03119BBa_S03119 Version 1 (Component)--Specify Parts List--
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
BBa_J70044BBa_J70044 Version 1 (Component)6his part for use with BioScaffold parts (G)GATCC(glycine serine)-6his-TAA
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
const.BBa_R1075 Version 1 (Component)Constitutive Promoter II
BBa_K209415BBa_K209415 Version 1 (Component)AarI B-C part, hM2D
BBa_K737017BBa_K737017 Version 1 (Component)This part conteins gvpC-20psi protein
BBa_K1114300BBa_K1114300 Version 1 (Component)This is the MoClo formatted part of BBa_B0015.
BBa_J70031BBa_J70031 Version 1 (Component)Linker for BioScaffold Parts, example of Gamma BioScaffold part
BBa_J70019BBa_J70019 Version 1 (Component)PsrI Right Testing Part for LASR parts
BBa_J70048BBa_J70048 Version 1 (Component)6his part for use with BioScaffold parts ATG-GGATCC (glycine serine)-6 His-TAA
BBa_T1001BBa_T1001 Version 1 (Component)Kill this part
VF2BBa_G00100 Version 1 (Component)Forward primer for sequencing/amplifying BioBrick parts (VF2)
BBa_K209401BBa_K209401 Version 1 (Component)AarI B-C part, Rs1.3
BBa_K737016BBa_K737016 Version 1 (Component)This part conteins gvpA protein's coding sequence.
BBa_J70010BBa_J70010 Version 1 (Component)A BioScaffold Part (Uses PpiI), for offset see Part Design page
nadEBBa_K1373000 Version 1 (Component)This part encodes NAD synthetase
BBa_K576003BBa_K576003 Version 1 (Component)Left Part of Self-Excising Ribozyme
BBa_K576004BBa_K576004 Version 1 (Component)Right Part of Self-Excising Ribozyme
BBa_K209019BBa_K209019 Version 1 (Component)Aar1 A-B part, PLCdelta-PH (Dictyostelium discoideum)
BBa_K1758376BBa_K1758376 Version 1 (Component)GHB / GBL biosensor - reporter part
BBa_K1696003BBa_K1696003 Version 1 (Component)L-lactate producing part1
BBa_J70012BBa_J70012 Version 1 (Component)A BioScaffold Part (Uses PsrI), Protein Head Remover see Part Design page
BsaI ->BBa_K1362425 Version 1 (Component)BsaI restriction site for RFC[???] cloning (in part in prefix)
BBa_K209018BBa_K209018 Version 1 (Component)Aar1 A-B part, cAR1 (Dictyostelium discoideum)
BBa_J70315BBa_J70315 Version 1 (Component)Test red bs part
BBa_J70498BBa_J70498 Version 1 (Component)Red {-1,4;0,5} PsrI part (for non protein/AG parts)
BBa_K1114301BBa_K1114301 Version 1 (Component)This is MoClo formatted part of BBa_B0015
BBa_K209406BBa_K209406 Version 1 (Component)AarI C-D part, Beta Pix