SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

BBa_K2066018
BBa_K2066018 Version 1 (Component)
UNS 2 Sequence, from Torella et al., 2013

CRY2
BBa_K1592015 Version 1 (Component)
photoreceptor cryptochrome 2 (CRY2)

BBa_K1982002
BBa_K1982002 Version 1 (Component)
Prokaryotic Cryptochrome 2 (CRY2) ( a blue light stimulated photoreceptor)

BBa_K1982009
BBa_K1982009 Version 1 (Component)
Eukaryotic Cryptochrome 2 (CRY2) ( a blue light stimulated photoreceptor)

BBa_J52008
BBa_J52008 Version 1 (Component)
luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)

BBa_K1935005
BBa_K1935005 Version 1 (Component)
White collar-2 (WC-2) - photoreceptor in Neurospora tetrasperma

AD-CRY2
BBa_K1884002 Version 1 (Component)
VP16AD-CRY2

VVD
BBa_K1616014 Version 1 (Component)
VVD - homodimer photoreceptor

SYFP2
BBa_K864100 Version 1 (Component)
Super Yellow Fluorescent Protein 2 (SYFP2)

BBa_K1150009
BBa_K1150009 Version 1 (Component)
CRY2

BBa_K1114107
BBa_K1114107 Version 1 (Component)
Bicistronic Design RBS 2, MoClo Format with BC fusion sites

BBa_K117002
BBa_K117002 Version 1 (Component)
LsrA promoter (indirectly activated by AI-2)

BBa_K1763442
BBa_K1763442 Version 1 (Component)
MaSp1/2[1:2]-12(1C3)

BBa_K1763438
BBa_K1763438 Version 1 (Component)
MaSp1/2[2:1]-12(1C3)

BBa_K1486020
BBa_K1486020 Version 1 (Component)
rLuc[2]

BBa_K517005
BBa_K517005 Version 1 (Component)
erg20-2

BBa_K1982005
BBa_K1982005 Version 1 (Component)
CRY2-VP64(Prokaryotic LACE system)

BBa_K1982010
BBa_K1982010 Version 1 (Component)
CRY2-VP64(Eukaryotic LACE system)

BBa_K079019
BBa_K079019 Version 1 (Component)
Lac 2 - operator library member

Cph8 gene
BBa_K566026 Version 1 (Component)
Cph8 gene for red-photoreceptor (constitutive expression)

BBa_K1935003
BBa_K1935003 Version 1 (Component)
White collar-1 (WC-1) - photoreceptor in Neurospora tetrasperma

BBa_K1763439
BBa_K1763439 Version 1 (Component)
MaSp1/2[2:1]-12(T7)

BBa_K1763443
BBa_K1763443 Version 1 (Component)
MaSp1/2[1:2]-12(T7)

BD-CRY2
BBa_K1592005 Version 1 (Component)
GalBD-CRY2 Fusion for Yeast-Two-Hybrid

BBa_K1486007
BBa_K1486007 Version 1 (Component)
IFP[2]

"Eye 2"
BBa_K1080011 Version 1 (Component)
ChlI2

BBa_K1799000
BBa_K1799000 Version 1 (Component)
pLsrA-2

2/3Gly
BBa_K1362467 Version 1 (Component)
other 2/3Gly

BBa_K500001
BBa_K500001 Version 1 (Component)
lignin degradation 2

Lock 2
BBa_J01011 Version 1 (Component)
Riboregulator Lock 2

Key 2
BBa_J01009 Version 1 (Component)
Riboregulator Key 2

BBa_K1399007
BBa_K1399007 Version 1 (Component)
GFP (mut3b) with SsrA-DAS+2 degradation tag

BBa_K203111
BBa_K203111 Version 1 (Component)
Constitutive promoter; 2 REU

BBa_K1763440
BBa_K1763440 Version 1 (Component)
MaSp1/2[1:1]-12(1C3)

BBa_I13513
BBa_I13513 Version 1 (Component)
Screening Plasmid 2

BBa_K1150040
BBa_K1150040 Version 1 (Component)
uniCAS RNAimer to Bla Target 2

EFE
BBa_K1065000 Version 1 (Component)
<html>2-oxoglutarate oxygenase/decarboxylase (EFE)</html>

2/3Gly
BBa_K1362464 Version 1 (Component)
2/3Gly

BBa_K1601007
BBa_K1601007 Version 1 (Component)
Cytochrome C P.Denitrificans

BBa_K1601000
BBa_K1601000 Version 1 (Component)
Cytochrome C S.oneidensis without stop codon

BBa_K917014
BBa_K917014 Version 1 (Component)
pLac promoter plus S. oneidensis tetraheme cytochrome c cymA

BBa_K1884008
BBa_K1884008 Version 1 (Component)
PSAD Promoter+GalAD-CRY2+UAS+PsbA+PSAD Terminator

BBa_M39901
BBa_M39901 Version 1 (Component)
blah 2

BBa_K1351029
BBa_K1351029 Version 1 (Component)
LMU Bacillus RBS collection 2

BBa_K1196015
BBa_K1196015 Version 1 (Component)
cytochrome c reductase

BBa_K1499202
BBa_K1499202 Version 1 (Component)
Deinococcus radiodurans uracil-DNA glycosylase 2