Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
ecfpBBa_E0020 Version 1 (Component)engineered cyan fluorescent protein derived from A. victoria GFP
BBa_K1995025BBa_K1995025 Version 1 (Component)this part can bind heavy metal ions
ECFPBBa_E0022 Version 1 (Component)enhanced cyan fluorescent protein derived from A. victoria GFP
CatBBa_I14033 Version 1 (Component)P(Cat)
BBa_K737017BBa_K737017 Version 1 (Component)This part conteins gvpC-20psi protein
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_T1001BBa_T1001 Version 1 (Component)Kill this part
BBa_K271001BBa_K271001 Version 1 (Component)Heavy-metal detector
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
BBa_K737016BBa_K737016 Version 1 (Component)This part conteins gvpA protein's coding sequence.
BBa_J70042BBa_J70042 Version 1 (Component)6his part for use with BioScaffold parts ATG-6his-GGATCC (glycine serine)
BBa_K586000BBa_K586000 Version 1 (Component)Cup-1 Heavy metal sensor
BBa_K371049BBa_K371049 Version 1 (Component)MPF(meta-prefix)
nadEBBa_K1373000 Version 1 (Component)This part encodes NAD synthetase
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_K1114300BBa_K1114300 Version 1 (Component)This is the MoClo formatted part of BBa_B0015.
BBa_K1875002BBa_K1875002 Version 1 (Component)This part contains an RBG polyA terminator
BBa_J24812BBa_J24812 Version 1 (Component)Heavy Metal Translocating P-type ATPase
BBa_M45077BBa_M45077 Version 1 (Component)Heavy Metal Binding Protein (hmbp) gene
BBa_K1355001BBa_K1355001 Version 1 (Component)Regulation and transport of mercury ions
BBa_K371050BBa_K371050 Version 1 (Component)MSF(meta-suffix)
BBa_J70044BBa_J70044 Version 1 (Component)6his part for use with BioScaffold parts (G)GATCC(glycine serine)-6his-TAA
BBa_J70048BBa_J70048 Version 1 (Component)6his part for use with BioScaffold parts ATG-GGATCC (glycine serine)-6 His-TAA
BBa_K400000BBa_K400000 Version 1 (Component)composite heavy metal-detector(Zn, Cd, As)
BBa_K1355004BBa_K1355004 Version 1 (Component)Mercury ions bioremediating device
BBa_K1355003BBa_K1355003 Version 1 (Component)Mercury ions accumulator device
BBa_K1355002BBa_K1355002 Version 1 (Component)Mercury ions detector device
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
BBa_K1875001BBa_K1875001 Version 1 (Component)This part contains a Kozak sequence
BBa_K1875003BBa_K1875003 Version 1 (Component)This part contains a GFP reporter
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_K415010BBa_K415010 Version 1 (Component)This is part K415006 with an appended Plux/cI promoter (R0065)
BBa_K1151001BBa_K1151001 Version 1 (Component)Histidine-rich metal-binding protein
BBa_K1875000BBa_K1875000 Version 1 (Component)This basic part contains a miniCMV promoter.
BBa_K1478002BBa_K1478002 Version 1 (Component)Top metal binding protein. Binds zinc, arsenic, copper and cadmium.
BBa_K1051008BBa_K1051008 Version 1 (Component)S. cerevisiae CAA terminator with stopcodon
BBa_K1613016BBa_K1613016 Version 1 (Component)It is a new part which can detect cadmium ions in liquid.
BBa_K1613015BBa_K1613015 Version 1 (Component)It is a new part which can detect cadmium ions in liquid.
BBa_K1613014BBa_K1613014 Version 1 (Component)It is a new part which can detect cadmium ions in liquid.