Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
HprBO_9167 Version 1 (Component) SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_I715047BBa_I715047 Version 1 (Component)HPP-A0 + Hin
HinBBa_J31000 Version 1 (Component)DNA-invertase Hin from Salmonella typhimurium
REBBa_J3101 Version 1 (Component)Recombinational Enhancer (RE) for Hin/Hix inverting
HPKBBa_J176028 Version 1 (Component)HPK
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
HSPBBa_K338001 Version 1 (Component)Heat Shock Promoter (HSP)
HIPBBa_K1166000 Version 1 (Component)FNR-HIP1
HP3 3BBa_B0101 Version 1 (Component)HP3 3
BBa_I715049BBa_I715049 Version 1 (Component)HPP-A1 + Hin
BBa_K115056BBa_K115056 Version 1 (Component)IPP -> OPP or DMAPP -> OPP
Hin LVABBa_J31001 Version 1 (Component)DNA invertase Hin tagged with LVA
BBa_I715051BBa_I715051 Version 1 (Component)HPP-A2 + Hin
BBa_K873002BBa_K873002 Version 1 (Component)HSP promoter
BBa_I715058BBa_I715058 Version 1 (Component)HPP - B1 (DBA) + Hin
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
BBa_K115055BBa_K115055 Version 1 (Component)Mevalonate-PP -> IPP
hpdBBa_K1747013 Version 1 (Component)hpd gene from Arabidopsis thaliana
BBa_K1489002BBa_K1489002 Version 1 (Component)Lpp-OmpA-Linker (pSB1C3)
HisBBa_K157011 Version 1 (Component)His affinity tag; Freiburg standard
BBa_K112615BBa_K112615 Version 1 (Component)rbs.LamB pp> in BBb
BBa_J119022BBa_J119022 Version 1 (Component)HPP Bsa J23100 promoter in pSB1A2
BBa_J119014BBa_J119014 Version 1 (Component)HPP assembly vector
BBa_K112614BBa_K112614 Version 1 (Component)rbs.PhoA pp> in BBb
BBa_J61054BBa_J61054 Version 1 (Component)[HIP-1] Promoter
BBa_J61055BBa_J61055 Version 1 (Component)[HIP-1fnr] Promoter
BBa_B0053BBa_B0053 Version 1 (Component)Terminator (His)
BBa_J176091BBa_J176091 Version 1 (Component)HPK-10xGal4-CFP
UppBO_26799 Version 1 (Component) uppBO_32564 Version 1 (Component) BBa_K1151015BBa_K1151015 Version 1 (Component)Hpn-LuxI coding device
BBa_J119076BBa_J119076 Version 1 (Component)GGA HPP Start Edge