Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
GerEBO_11469 Version 1 (Component) mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
FurBO_11498 Version 1 (Component) hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K1956041BBa_K1956041 Version 1 (Component)gRNA for Chloramphenicol gene
BBa_K1956042BBa_K1956042 Version 1 (Component)gRNA for Chloramphenicol gene
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
CmRBBa_J61000 Version 1 (Component)chloramphenicol resistance cassette
cmRBBa_P1004 Version 1 (Component)chloramphenicol resistance cassette
BBa_K115002BBa_K115002 Version 1 (Component)RNA thermometer (FourU)
BBa_K1956006BBa_K1956006 Version 1 (Component)gRNA for Chloramphenicol gene under lambda pL hybrid promoter
BBa_K115001BBa_K115001 Version 1 (Component)RNA thermometer (ROSE)
CmRBBa_J31005 Version 1 (Component)chloramphenicol acetyltransferase (forwards, CmF) [cf. BBa_J31004]
BBa_I2032BBa_I2032 Version 1 (Component)T7 RNA polymerase
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
BBa_K1699002BBa_K1699002 Version 1 (Component)gRNA for SaCas9 targeting human ubiquitin B gene
BBa_K1956007BBa_K1956007 Version 1 (Component)gRNA for Chloramphenicol gene under lambda pL hybrid promoter
BBa_J70029BBa_J70029 Version 1 (Component)RBS + mCherry gene, optimized for expression in Me. florum and E. coli
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K1956045BBa_K1956045 Version 1 (Component)gRNA for Kanamycin gene
BBa_K1956043BBa_K1956043 Version 1 (Component)gRNA for mCherry gene
CATBBa_C0100 Version 1 (Component)Enzyme, chloramphenicol acetyltransferase or CAT
BBa_K1956044BBa_K1956044 Version 1 (Component)gRNA for mCherry gene
scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
BBa_K1956011BBa_K1956011 Version 1 (Component)gRNA for Chloramphenicol gene under lambda pL hybrid promoter with terminator
CmR-TBBa_K143064 Version 1 (Component)Chloramphenicol resistance protein - Terminator
BBa_K531006BBa_K531006 Version 1 (Component)Optimized esp gene for <i>C. crescentus</i>
BBa_K1699004BBa_K1699004 Version 1 (Component)gRNA for SaCas9 targeting human ubiquitin B gene under U6 promoter
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K1015009BBa_K1015009 Version 1 (Component)Chloramphenicol resistance gene+FRT
XylE ibBBa_K1062003 Version 1 (Component)Guide RNA (gRNA) target for XylE (end of gene)
XylE imBBa_K1062002 Version 1 (Component)Guide RNA (gRNA) target for XylE (middle of gene)