Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

GFP
BBa_E0040 Version 1 (Component)
green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

eyfp
BBa_E0030 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

BBa_K1361997
BBa_K1361997 Version 1 (Component)
CsgB, curlin nucleator protein, minor subunit in curli complex

YFP
BBa_E0032 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

ecfp
BBa_E0020 Version 1 (Component)
engineered cyan fluorescent protein derived from A. victoria GFP

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_K1316015
BBa_K1316015 Version 1 (Component)
pRhamnose regulating csgB and csgA curli proteins

BBa_K1361998
BBa_K1361998 Version 1 (Component)
Curli Fiber assembly associated protein CsgA, CsgC

ECFP
BBa_E0022 Version 1 (Component)
enhanced cyan fluorescent protein derived from A. victoria GFP

BBa_K1404006
BBa_K1404006 Version 1 (Component)
p70-CsgA, curli generator

BBa_K1404003
BBa_K1404003 Version 1 (Component)
CsgA, Curli subunit

BBa_K1404007
BBa_K1404007 Version 1 (Component)
p70-CsgA-His, His-tagged curli generator

BBa_K1361992
BBa_K1361992 Version 1 (Component)
CsgE, CsgF, CsgG, the outer membrane secrete device for curli fiber

BBa_K1316018
BBa_K1316018 Version 1 (Component)
RBS + csgB curli-forming gene

LuxR
BBa_I0462 Version 1 (Component)
luxR Protein Generator

BBa_K342003
BBa_K342003 Version 1 (Component)
OmpR234 protein, with higher effect on Curli promoter

Coupling
Coupling Version 1 (Component)
Translational coupler

BBa_K1404008
BBa_K1404008 Version 1 (Component)
p70-CsgA-His*2, double His-tagged curli generator

BBa_K1404004
BBa_K1404004 Version 1 (Component)
CsgA+tagHis, curli

BBa_K1361993
BBa_K1361993 Version 1 (Component)
CsgC, curli fiber secrete accessory molecules

BBa_K1404005
BBa_K1404005 Version 1 (Component)
CsgA+tagHis*2, curli

tetA(C)f
BBa_J31007 Version 1 (Component)
tetracycline resistance protein TetA(C) (forward), [cf. BBa_J31006]

Curli
BBa_K342000 Version 1 (Component)
Curli Promoter induced by temperature, shaking speed and osmolarity,

BBa_K1361994
BBa_K1361994 Version 1 (Component)
Curli Fiber major monomer-CsgA with his tag

BBa_K1361995
BBa_K1361995 Version 1 (Component)
CsgBtrunc, curli fiber nucleator with a C-terminnal deletion

BBa_K1361999
BBa_K1361999 Version 1 (Component)
Curli Fiber major monomer-CsgA

BBa_K1361005
BBa_K1361005 Version 1 (Component)
CsgE, CsgF, CsgG, the outer membrane secrete device for curli fiber, at relatively low constitutive

CsgD
BBa_K1019001 Version 1 (Component)
CsgD: positive regulator of curlin genes

araC
BBa_C0080 Version 1 (Component)
araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)