SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
SEGA021SEGA021 Version 1 (Component)natural linear DNA.
SEGA022SEGA022 Version 1 (Component)natural linear DNA.
BBa_K1499202BBa_K1499202 Version 1 (Component)Deinococcus radiodurans uracil-DNA glycosylase 2
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
BBa_K1499201BBa_K1499201 Version 1 (Component)Deinococcus radiodurans uracil-DNA glycosylase 1
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
//dnadna Version 1 (Collection) BBa_K1499200BBa_K1499200 Version 1 (Component)Deinococcus radiodurans UV DNA damage endonuclease - uvsE
BBa_K602000BBa_K602000 Version 1 (Component)<i>Deinococcus radiodurans</i> PprI
BBa_K602001BBa_K602001 Version 1 (Component)<i>Deinococcus radiodurans</i> PprA
BBa_K602003BBa_K602003 Version 1 (Component)<i>Deinococcus radiodurans</i> RecA
BBa_K602002BBa_K602002 Version 1 (Component)<i>Deinococcus radiodurans</i> PprM
Sod Cu/ZnBBa_K847004 Version 1 (Component)''Deinococcus radiodurans'' Superoxide dismutase, SodCu/Zn
BBa_J52008BBa_J52008 Version 1 (Component)luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)
BBa_K2082104BBa_K2082104 Version 1 (Component)Uracil glycosylase inhibitor
DR-BphBBa_K646002 Version 1 (Component)Deinococcus radiodurans bacteriophytochrome
CreBBa_J61047 Version 1 (Component)Cre DNA recombinase
DnaABO_9088 Version 1 (Component) DpsGBBa_K847001 Version 1 (Component)''Deinococcus radiodurans'' DNA repair mechanism, DpsG
DpsMP1BBa_K847002 Version 1 (Component)''Deinococcus radiodurans'' DNA repair mechanism, DpsMP1
recABBa_K847000 Version 1 (Component)''Deinococcus radiodurans'' DNA repair mechanism, Recombinase A
BBa_K729001BBa_K729001 Version 1 (Component)irrE from Deinococcus radiodurans
BBa_K1967020BBa_K1967020 Version 1 (Component)''Deinococcus radiodurans'' DpsG
BBa_K1967021BBa_K1967021 Version 1 (Component)''Deinococcus radiodurans'' DpsMP1
BBa_K115002BBa_K115002 Version 1 (Component)RNA thermometer (FourU)
BBa_K497001BBa_K497001 Version 1 (Component)Deinococcus radiodurans bacteriophytochrome gene
BBa_K115001BBa_K115001 Version 1 (Component)RNA thermometer (ROSE)
BBa_I2032BBa_I2032 Version 1 (Component)T7 RNA polymerase
MntHBBa_K847005 Version 1 (Component)''Deinococcus radiodurans'' Manganese Transporter, MntH
SodMnBBa_K847003 Version 1 (Component)''Deinococcus radiodurans'' Superoxide dismutase, SodMn
BBa_K497013BBa_K497013 Version 1 (Component)Deinococcus radiodurans bacteriophytochrome fwd primer
BBa_K497015BBa_K497015 Version 1 (Component)Deinococcus radiodurans bacteriophytochrome rvs primer
BBa_K953001BBa_K953001 Version 1 (Component)Deinococcus radiodurans Bacteriophytochrome with RBS (E. coli Codon Optimised)
BBa_K346000BBa_K346000 Version 1 (Component)RBS(B0032)+T3 DNA-directed RNA polymerase
BBa_K1673202BBa_K1673202 Version 1 (Component)Formamidopyrimidine DNA glycosylase (Mutation Optimized)
BBa_K497014BBa_K497014 Version 1 (Component)Deinococcus radiodurans bacteriophytochrome fwd primer with RBS
HinBBa_J31000 Version 1 (Component)DNA-invertase Hin from Salmonella typhimurium
BBa_K165006BBa_K165006 Version 1 (Component)Zif268-HIV DNA-binding domain
BBa_K497003BBa_K497003 Version 1 (Component)Deinococcus radiodurans bacteriophytochrome gene with Ribosome Binding Site
BBa_K497007BBa_K497007 Version 1 (Component)Synechocystis heme oxygenase 1 with Deinococcus radiodurans bacteriophytochrome & RBS
BBa_K646006BBa_K646006 Version 1 (Component)T7 promoter with Heme oxygenase and Deinococcus radiodurans bacteriophytochrome
BBa_K646005BBa_K646005 Version 1 (Component)T7 promoter with Heme oxygenase and Deinococcus radiodurans bacteriophytochrome
SYFP2BBa_K864100 Version 1 (Component)Super Yellow Fluorescent Protein 2 (SYFP2)
Bxb1_IntBBa_K907000 Version 1 (Component)Mycobacterium Phage Bxb1 gp35, DNA integrase
BBa_K1114107BBa_K1114107 Version 1 (Component)Bicistronic Design RBS 2, MoClo Format with BC fusion sites
lexA DBDBBa_K165009 Version 1 (Component)LexA DNA-binding domain