iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_I13507BBa_I13507 Version 1 (Component)Screening plasmid intermediate
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
BBa_I13504BBa_I13504 Version 1 (Component)Screening plasmid intermediate
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_I746200BBa_I746200 Version 1 (Component)FepA L8T Mutant - Large Diffusion pore for E. coli outer membrane.
FurBO_11498 Version 1 (Component) BBa_I746009BBa_I746009 Version 1 (Component)AIP generator + outer membrane permeability
BBa_I746203BBa_I746203 Version 1 (Component)Intermediate for Outer Membrane Permeability Device
OmpABBa_K103006 Version 1 (Component)OmpA outer membrane protein A fused to linker; displays proteins on cell surface
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_J09855BBa_J09855 Version 1 (Component)Constitutive luxR device with pLuxR
CD4 signalBBa_I712009 Version 1 (Component)CD4 signal peptide; localizes to plasma membrane
BBa_I13500BBa_I13500 Version 1 (Component)Screening plasmid intermediate
mRFP1BBa_I13502 Version 1 (Component)Screening plasmid intermediate
BBa_I746202BBa_I746202 Version 1 (Component)Outer Membrane Permeability Device
BBa_I746201BBa_I746201 Version 1 (Component)Outer Membrane Permeability Device
oprFBBa_K1172501 Version 1 (Component)Outer membrane porin OprF from Pseudomonas fluorescens
BBa_K1051105BBa_K1051105 Version 1 (Component)TOM40;targeting peptide to mitochondria outer membrane
BBa_F1610BBa_F1610 Version 1 (Component)3OC<sub>6</sub>HSL Sender Device
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_F2622BBa_F2622 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
BBa_J36837BBa_J36837 Version 1 (Component)Outer membrane protein A, aa 46-159
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_I746010BBa_I746010 Version 1 (Component)AIP generator + outer membrane permeability
BBa_I13974BBa_I13974 Version 1 (Component)intermediate for lac synchro device
BBa_J36836BBa_J36836 Version 1 (Component)Outer membrane protein A, aa 46-66
BBa_K1361992BBa_K1361992 Version 1 (Component)CsgE, CsgF, CsgG, the outer membrane secrete device for curli fiber
BBa_I13516BBa_I13516 Version 1 (Component)Screening Plasmid Intermediate
fhuABBa_K259000 Version 1 (Component)fhuA - Outer membrane transporter for ferrichrome-iron
PelBBBa_J32015 Version 1 (Component)PelB leader sequence; directs protein to E. coli periplasmic membrane
BBa_I763026BBa_I763026 Version 1 (Component)LacI coding device regulated by pTetR
BBa_M1028BBa_M1028 Version 1 (Component)tolC-Outer membrane protein
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
BBa_K331008BBa_K331008 Version 1 (Component)Outer Membrane Protein OmpA
BBa_K1393003BBa_K1393003 Version 1 (Component)outer membrane porin protein C from Escherichia coli BL21(DE3)
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_K1051106BBa_K1051106 Version 1 (Component)targeting peptide to mitochondria outer membrane
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_F2621BBa_F2621 Version 1 (Component)3OC<sub>6</sub>HSL Receiver Device
eCPX-nSA-cBBa_M50000 Version 1 (Component)Streptavidin binding outer membrane protein