Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Codon Optimised Sequence Pull
codon_optimisation Version 1 (Activity)
Used to indicate that a sequence was codon optimised after pulling from the source and before submission

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

GC Optimised Sequence Pull
GC_Optimised Version 1 (Activity)
Used to indicate that a sequence was GC optimised after pulling from the source and before submission

BBa_K844000
BBa_K844000 Version 1 (Component)
10x-Histidine (10x-His) Tag with double stop codon (TAATAA)

mCherry
BBa_J06504 Version 1 (Component)
monomeric RFP optimized for bacteria

Scar25 ATG
BBa_K1319106 Version 1 (Component)
RFC 25 Translation Start Scar Sequence

BBa_M1721
BBa_M1721 Version 1 (Component)
Optimized Hepcidin + 6x spider silk + 10x His Tag

BBa_M1720
BBa_M1720 Version 1 (Component)
Optimized Hepcidin + 6x spider silk

RGD-His-St
BBa_K133036 Version 1 (Component)
RGD-His affinity tag-Stop

HisTag
BBa_J18909 Version 1 (Component)
His tag (6xHis; E. coli - optimized)

His-Stop
BBa_K133133 Version 1 (Component)
His affinity tag-stop

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_M1718
BBa_M1718 Version 1 (Component)
Optimized Hepcidin + 1x spider silk

BBa_J04031
BBa_J04031 Version 1 (Component)
GFP w/LVA tag

BBa_K844007
BBa_K844007 Version 1 (Component)
Spider Silk 1x Subunit "F" (Fewest tRNA codon optimized) with Met (ATG) added

hixC
BBa_J44000 Version 1 (Component)
hixC binding site for Salmonella typhimurium Hin recombinase

BBa_K844008
BBa_K844008 Version 1 (Component)
Spider Silk 1x Subunit "B" (Balanced tRNA codon optimized) with Met (ATG) added

BBa_K844004
BBa_K844004 Version 1 (Component)
Spider Silk 1x Subunit "B" (Balanced tRNA codon optimized)

HA
BBa_I712008 Version 1 (Component)
HA affinity tag

NLS
BBa_J176008 Version 1 (Component)
NLS

BBa_K844006
BBa_K844006 Version 1 (Component)
Spider Silk 1x Subunit "W" with Met (ATG) start codon

BBa_K844017
BBa_K844017 Version 1 (Component)
Spider Silk Generator - 10x "F" Silk Construct with His Tag

BBa_M1727
BBa_M1727 Version 1 (Component)
Promoter + RBS + Hepcidin + Silk + His-Tag

BBa_K105012
BBa_K105012 Version 1 (Component)
10 aa flexible protein domain linker

PEST
BBa_J176018 Version 1 (Component)
PEST

BBa_M1716
BBa_M1716 Version 1 (Component)
Hepcidin Optimized for E. coli

linker
BBa_K133132 Version 1 (Component)
8 aa protein domain linker

spacer
BBa_B0040 Version 1 (Component)
Spacer.1 (generic)

BBa_K1162306
BBa_K1162306 Version 1 (Component)
Antimicrobial spider silk generator with C-terminus 10x His-Tag

NLSmycSTOP
BBa_J176031 Version 1 (Component)
NLS myc stop

BBa_K1150016
BBa_K1150016 Version 1 (Component)
HA tag

BBa_K1223006
BBa_K1223006 Version 1 (Component)
His-Tag

PatgB4HT
BBa_K844016 Version 1 (Component)
Spider Silk Generator - 4x "B" Silk Construct with His Tag

mCherry
BBa_J06505 Version 1 (Component)
monomeric RFP optimized for bacteria

BBa_K844003
BBa_K844003 Version 1 (Component)
Spider Silk 1x Subunit "F" (Fewest tRNA codon optimized)

BBa_M1719
BBa_M1719 Version 1 (Component)
Hepcidin and His-tag

BBa_F1610
BBa_F1610 Version 1 (Component)
3OC₆HSL Sender Device

spilk 7.0.
BBa_M36500 Version 1 (Component)
Spider Silk Hexamer

BBa_K1312004
BBa_K1312004 Version 1 (Component)
pSB1C3 plus 6x His tag

Hin
BBa_J31000 Version 1 (Component)
DNA-invertase Hin from Salmonella typhimurium

BBa_K1162307
BBa_K1162307 Version 1 (Component)
WAM-1 antimicrobial peptide fused with 8x spider silk protein, with 10x His-Tag

RFC105 A
BBa_K1362414 Version 1 (Component)
N-terminal start overhang (T)(A)-(G)ATG=RBS+Start RFC[105] A

BBa_K1162009
BBa_K1162009 Version 1 (Component)
10x-Histidine (10x-His) Tag with Met (ATG) For N-terminal purification

BBa_K1974020
BBa_K1974020 Version 1 (Component)
Snowdrop lectin+linker+6X His-Tag