Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

iGEM Feature Libraries
igem_feature_libraries_collection Version 1 (Unknown)
A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

Free Genes Feature Libraries
free_genes_feature_libraries_collection Version 1 (Unknown)
A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_J04450
BBa_J04450 Version 1 (Component)
RFP Coding Device

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

RIP
BBa_K237000 Version 1 (Component)
RIP - Quorum sensing inhibitor of Staphylococcus spp. (Including MRSA)

sRIP
BBa_K237003 Version 1 (Component)
RIP +export signal (OmpA). Quorum sensing inhibitor of Staphylococcus spp. (Including MRSA)

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

mCherry
BBa_J06504 Version 1 (Component)
monomeric RFP optimized for bacteria

BBa_J56012
BBa_J56012 Version 1 (Component)
Invertible sequence of dna includes Ptrc promoter

BBa_K237004
BBa_K237004 Version 1 (Component)
Constitutive sRIP Generator. RIP - Quorum sensing inhibitor of Staphylococcus spp.

BBa_K237002
BBa_K237002 Version 1 (Component)
Constitutive RIP Generator. RIP - Quorum sensing inhibitor of Staphylococcus spp.

BBa_K237006
BBa_K237006 Version 1 (Component)
IPTG inducible sRIP Generator. RIP - Quorum sensing inhibitor of Staphylococcus spp.

BBa_K237001
BBa_K237001 Version 1 (Component)
IPTG inducible RIP Generator. RIP - Quorum sensing inhibitor of Staphylococcus spp.

pSC101
BBa_I50041 Version 1 (Component)
pSC101 origin of replication, reverse

RFP2
BBa_I715023 Version 1 (Component)
Carboxyl portion of RFP

RBS-RFP
BBa_K093005 Version 1 (Component)
RFP with RBS

RFP1
BBa_I715022 Version 1 (Component)
Amino Portion of RFP

BBa_K081014
BBa_K081014 Version 1 (Component)
RFP protein generator - PoPS->RFP

BBa_K1499500
BBa_K1499500 Version 1 (Component)
quorum sensing machinery that activates GFP expression

BBa_J13002
BBa_J13002 Version 1 (Component)
TetR repressed POPS/RIPS generator

AraC O2
BBa_R0081 Version 1 (Component)
Inhibitor (AraC loop attachment with O2 site)

mRFPr
BBa_J31008 Version 1 (Component)
RFP reverse

LacI
BBa_K143033 Version 1 (Component)
LacI (Lva^-, N-terminal deletion) regulatory protein

BBa_M39016
BBa_M39016 Version 1 (Component)
Quorum Sensing Device

BBa_K1073002
BBa_K1073002 Version 1 (Component)
Inducible promoter of the lux quorum sensing system with RBS

BBa_K103003
BBa_K103003 Version 1 (Component)
B domain of Staphylococcal protein A

BBa_K729004
BBa_K729004 Version 1 (Component)
Nuclease from Staphylococcus aureus

pPQS
BBa_K1157000 Version 1 (Component)
promoter sequence for PQS quorum sensing

pRhl + RBS
BBa_K1073001 Version 1 (Component)
Inducible promoter of the rhl quorum sensing system with RBS

pLas + RBS
BBa_K1073003 Version 1 (Component)
Inducible promoter of the las quorum sensing system with RBS

BBa_I13401
BBa_I13401 Version 1 (Component)
GFP reporter for RHS of library test constructs

BBa_K199118
BBa_K199118 Version 1 (Component)
T7 promoter + RBS + RFP

BBa_K359005
BBa_K359005 Version 1 (Component)
Senses AIP and has RFP reporter (from Agr quorum sensing system)

BBa_K843007
BBa_K843007 Version 1 (Component)
Cell Limiter using quorum sensing

BBa_K624033
BBa_K624033 Version 1 (Component)
minC cell division inhibitor (revised)

BBa_K1351036
BBa_K1351036 Version 1 (Component)
Quorum sensing two component system (AIP-II sensing histidine kinase agrC, response regulator agrA)

BBa_K1157009
BBa_K1157009 Version 1 (Component)
Quorum sensing receptor pqsR generator

BBa_K734004
BBa_K734004 Version 1 (Component)
sfGFP regulated by LasR quorum sensing pathway