iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
Scar25 ATGBBa_K1319106 Version 1 (Component)RFC 25 Translation Start Scar Sequence
BBa_K1159117BBa_K1159117 Version 1 (Component)Red light triggered Kill Switch for plants translation unit (PhyB/PIF3 version)
BBa_K1159118BBa_K1159118 Version 1 (Component)Red light triggered Kill Switch for plants translation unit (PhyB/PIF6 version)
BBa_K1159119BBa_K1159119 Version 1 (Component)Red light triggered TEV Protease with FRET Reporter for plants translation unit (PhyB/PIF3 version)
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
AraBBa_K808000 Version 1 (Component)araC-Pbad - Arabinose inducible regulatory promoter/repressor unit
BBa_K1159120BBa_K1159120 Version 1 (Component)Red light triggered TEV Protease with FRET Reporter for plants translation unit (PhyB/PIF6 version)
BBa_I9026BBa_I9026 Version 1 (Component)rhlI translational unit
FurBO_11498 Version 1 (Component) CouplingCoupling Version 1 (Component)Translational coupler
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K1159113BBa_K1159113 Version 1 (Component)Eukaryotic light-switchable TEV Protease translational unit (PhyB/PIF3 based)
BBa_K1159115BBa_K1159115 Version 1 (Component)Eukaryotic light-switchable TEV Protease translational unit (PhyB/PIF3 based) with downstream IRES
BBa_K606013BBa_K606013 Version 1 (Component)SpoVG RFPmCherry double terminator. Translational unit for B. Subtilis
BBa_K322124BBa_K322124 Version 1 (Component)Red light sensor Cph8 (from Coliroid) with RBS
BBa_K1159114BBa_K1159114 Version 1 (Component)Eukaryotic light-switchable TEV Protease translational unit (PhyB/PIF6 based)
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
BBa_K1159116BBa_K1159116 Version 1 (Component)Eukaryotic light-switchable TEV Protease translational unit (PhyB/PIF6 based) with downstream IRES
BBa_J44001BBa_J44001 Version 1 (Component)Reverse RBS (RBS<sub>rev</sub>) -- corresponds to BBa_B0030
BLpBBa_K238013 Version 1 (Component)Exact promoter of the blue light receptor
eforRedBBa_K592012 Version 1 (Component)eforRed, red chromoprotein
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K801039BBa_K801039 Version 1 (Component)SV40NLS-GAL4AD-linker-PIF3 (part for GAL4/LexA based light-switchable promoter system)
BBa_J70428BBa_J70428 Version 1 (Component){7,12:15,10} red version
BBa_I711005BBa_I711005 Version 1 (Component)Melanogenesis with red light trigger
BBa_E2030BBa_E2030 Version 1 (Component)enhanced version of EYFP, yeast-optimized
REBBa_J3101 Version 1 (Component)Recombinational Enhancer (RE) for Hin/Hix inverting
RGD-His-StBBa_K133036 Version 1 (Component)RGD-His affinity tag-Stop
BBa_K1537015BBa_K1537015 Version 1 (Component)35S promoter+translation initiation optimized sequence for dicot+Mass translation enhancer
BBa_K1300005BBa_K1300005 Version 1 (Component)ccdB Translational Unit (with RBS)
BBa_K592016BBa_K592016 Version 1 (Component)B0034-YF1-B0034-FixJ, blue light sensor and RR with RBS
BBa_K648029BBa_K648029 Version 1 (Component)OR, operating region for Lambda switch
BBa_K568001BBa_K568001 Version 1 (Component)Optogenetical AND-Gate red/blue light
BBa_K1319020BBa_K1319020 Version 1 (Component)Translational unit of mRFP-galectin3-his
BBa_K801041BBa_K801041 Version 1 (Component)SV40NLS-PhyB-linker-LexA (part for a LexA based light-switchable promoter system)