SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

eyfp
BBa_E0030 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

YFP
BBa_E0032 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

ECFP
BBa_E0022 Version 1 (Component)
enhanced cyan fluorescent protein derived from A. victoria GFP

luxI
BBa_C0061 Version 1 (Component)
autoinducer synthetase for AHL

BBa_K179000
BBa_K179000 Version 1 (Component)
XRE human enhancer enhanced by Ahr-Arnt-dioxin complex

EYFP
BBa_E0034 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

RE
BBa_J3101 Version 1 (Component)
Recombinational Enhancer (RE) for Hin/Hix inverting

BBa_C0261
BBa_C0261 Version 1 (Component)
AHL-making Enzyme, luxI (+RBS)

BBa_E2030
BBa_E2030 Version 1 (Component)
enhanced version of EYFP, yeast-optimized

ECFP
BBa_E0024 Version 1 (Component)
enhanced cyan fluorescent protein derived from A. victoria GFP

SBFP2
BBa_K156010 Version 1 (Component)
SBFP2 (strongly enhanced blue fluorescent protein)

luxI
BBa_C0161 Version 1 (Component)
autoinducer synthetase for AHL (no LVA)

Coupling
Coupling Version 1 (Component)
Translational coupler

BBa_K2066543
BBa_K2066543 Version 1 (Component)
Synthetic Enhancer Project: Enhancer/NRI binding sites

Cre
BBa_J61047 Version 1 (Component)
Cre DNA recombinase

EYFP
BBa_E0036 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

ECFP
BBa_E0026 Version 1 (Component)
enhanced cyan fluorescent protein derived from A. victoria GFP

BBa_K542010
BBa_K542010 Version 1 (Component)
Enhanced Lumazine Synthase (ELS)

BBa_K2066544
BBa_K2066544 Version 1 (Component)
Synthetic Enhancer Project: glnAp2 promoter

BBa_K2066546
BBa_K2066546 Version 1 (Component)
Synthetic Enhancer Project: glnG (NRI)

BBa_E2020
BBa_E2020 Version 1 (Component)
enhanced version of ECFP, yeast-optimized

pRE
BBa_K116603 Version 1 (Component)
pRE promoter from λ phage

AAR
BBa_K590032 Version 1 (Component)
Acyl-ACP Reductase (AAR) - Synechococcus elongatus PCC7942

BBa_K2066545
BBa_K2066545 Version 1 (Component)
Synthetic Enhancer Project: LacI binding site (LacO)

enhanced
BBa_K2075011 Version 1 (Component)
enhanced Green fluorescenc protein (GFP)

fhlA
BBa_K778001 Version 1 (Component)
fhlA: a transcriptional activator for enhanced hydrogen production

BBa_K1537015
BBa_K1537015 Version 1 (Component)
35S promoter+translation initiation optimized sequence for dicot+Mass translation enhancer

BBa_K2066547
BBa_K2066547 Version 1 (Component)
Synthetic Enhancer Project: Spacer between Promoter and RBS

BBa_M45003
BBa_M45003 Version 1 (Component)
Enhancer

BBa_K2066538
BBa_K2066538 Version 1 (Component)
Synthetic Enhancer Project: NRII2302 Mutant Coding

Prm +
BBa_I12006 Version 1 (Component)
Modified lamdba Prm promoter (repressed by 434 cI)

eGFP+His
BBa_K193202 Version 1 (Component)
EGFP(enhanced Green Fluorescent Protein) with His tag

Polyargini
BBa_K792004 Version 1 (Component)
Import enhancer - Polyarginine (trojan peptide)

BBa_K792009
BBa_K792009 Version 1 (Component)
Yeast exportable His-rich peptide w/enhanced import (1)

TAT-trojan
BBa_K792003 Version 1 (Component)
Import enhancer - HIV TAT penetratin (trojan peptide)

eGFP
BBa_K629007 Version 1 (Component)
eGFP, enhanced green fluorescent protein

BBa_K2050420
BBa_K2050420 Version 1 (Component)
Enhanced green fluorescent protein (EGFP) coding sequence (human-optimized)

BBa_K2066126
BBa_K2066126 Version 1 (Component)
Synthetic Enhancer Project: NRII2302 Upstream Regulatory Region with Promoter

BBa_K2170001
BBa_K2170001 Version 1 (Component)
Secretory eukaryotic biotin binding receptor with enhanced monomeric avidin

BBa_K2170050
BBa_K2170050 Version 1 (Component)
Secretory prokaryotic biotin binding receptor with enhanced monomeric avidin

BBa_K2066533
BBa_K2066533 Version 1 (Component)
tetO Synthetic Enhancer Helper Cassette

BBa_K228004
BBa_K228004 Version 1 (Component)
NahR( reverse) - salicylate promoter

BBa_K2066531
BBa_K2066531 Version 1 (Component)
Synthetic Enhancer Project: 3X TetO Binding Cassette(52S)

BBa_K2066532
BBa_K2066532 Version 1 (Component)
Synthetic Enhancer Project: 2X TetO Binding Cassette (55AS)

BBa_K1094400
BBa_K1094400 Version 1 (Component)
Enhanced green fluorescent protein (eGFP)

sRBS Pehs
BBa_K316000 Version 1 (Component)
Reverse strand coding Enhanced LacI-hyperspank promoter