SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_C0261BBa_C0261 Version 1 (Component)AHL-making Enzyme, luxI (+RBS)
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
BBa_K1886001BBa_K1886001 Version 1 (Component)AHL single-cycled oscillation
BBa_K2066019BBa_K2066019 Version 1 (Component)UNS 3 Sequence, from Torella et al., 2013
RhIBBa_I14017 Version 1 (Component)P(Rhl)
BBa_K1886002BBa_K1886002 Version 1 (Component)AHL,DPD double-cycled oscillation
BBa_J37019BBa_J37019 Version 1 (Component)AHL induced LuxR generator
BBa_K176028BBa_K176028 Version 1 (Component)TetR repressible AHL->PoPS Receiver (Very High LuxR): pCon 0.70->luxR+pLux/Tet->PoPS
rhIIBBa_C0170 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL (no LVA)
BBa_K546000BBa_K546000 Version 1 (Component)Lux pL controlled LuxR with lux pR autoinducing LuxI(lva tag)- AHL.
BBa_K2066506BBa_K2066506 Version 1 (Component)RiboJ (Ribozyme Insulator) Lou et. al. 2012
SINGLEBBa_K1433019 Version 1 (Component)P-A-T-T-B-B0034-GFP-T
BBa_I722011BBa_I722011 Version 1 (Component)rhl producer followed by a AHL acceptor
BBa_K137018BBa_K137018 Version 1 (Component)AHL receiver + GFP
BBa_K648028BBa_K648028 Version 1 (Component)Cro, Lamda Repressor which activates the lytic cycle
BBa_I13977BBa_I13977 Version 1 (Component)intermediate for lac relaxation oscillator
BBa_K1799019BBa_K1799019 Version 1 (Component)AHL-induced LacZ Generator
BBa_I13907BBa_I13907 Version 1 (Component)Ring Oscillator Synchronization Device (lac)
BBa_K772005BBa_K772005 Version 1 (Component)AHL generator: LasI
BBa_J24018BBa_J24018 Version 1 (Component)TetR promoted AHL sensor and LacI producer
BBa_K137019BBa_K137019 Version 1 (Component)AHL receiver + tet inverter + GFP
BBa_K176125BBa_K176125 Version 1 (Component)TetR repressible AHL->PoPS Receiver (High LuxR): pCon 0.36->luxR+pLux/Tet->PoPS
BBa_K1926001BBa_K1926001 Version 1 (Component)A cyclic promoter of Cyclin E from human genome
BBa_K233313BBa_K233313 Version 1 (Component)ahl induced ahl producer
sinIBBa_K594001 Version 1 (Component)a luxI homologous AHL synthetase from Sinorhizobium meliloti 1021
BBa_K137076BBa_K137076 Version 1 (Component)AHL inducible production of hydrogen peroxide
BBa_K395163BBa_K395163 Version 1 (Component)KanR activated by RhlR and C4HSL(AHL of Rhl family)
BBa_K116669BBa_K116669 Version 1 (Component)Oscillator + Tuner + Reporter
KaiABCBBa_K1745001 Version 1 (Component)KaiABC Oscillator
BBa_J64990BBa_J64990 Version 1 (Component)AHL driven glnG
BBa_K772004BBa_K772004 Version 1 (Component)AHL regulated PoPS generator: Las receiver device
raiIBBa_K594007 Version 1 (Component)a luxI homologous AHL synthetase from Rhzobium etli CFN 42
BBa_J36843BBa_J36843 Version 1 (Component)Streptavidin, single-chain dimer + His6 tag (no start codon)
BBa_K137078BBa_K137078 Version 1 (Component)AHL -> H2O2
BBa_K1165009BBa_K1165009 Version 1 (Component)CepI AHL Synthase
BBa_I13976BBa_I13976 Version 1 (Component)intermediate for lac relaxation oscillator