iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Amp CasBBa_I13800 Version 1 (Component)Ampicillin Resistance Cassette
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
CatBBa_I14033 Version 1 (Component)P(Cat)
BBa_K864150BBa_K864150 Version 1 (Component)Cat-SacB cassette for scarless chromosomal knockout
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K314103BBa_K314103 Version 1 (Component)Lac induced expression cassette
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
FurBO_11498 Version 1 (Component) hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
sacBBBa_K322921 Version 1 (Component)B. subtilis levansucrase. Lethal to E. coli in presence of sucrose.
Restriction_sitesRestriction_sites Version 1 (Component)SacI - KpnI - SmaI - BamHI - XbaI - SalI - PstI - SphI - HindIII - NotI
BBa_K314100BBa_K314100 Version 1 (Component)High constitutive expression cassette
kanRBBa_P1003 Version 1 (Component)kanamycin resistance cassette
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K1520504BBa_K1520504 Version 1 (Component)Rbs-luxI(scarless)
BBa_I739001BBa_I739001 Version 1 (Component)Constitutive expression cassette for TetR +LVA (J23100.B0034.C0040.B0015)
BBa_J33201BBa_J33201 Version 1 (Component)E. coli chromosomal ars promoter with arsR repressor gene
BBa_K1520505BBa_K1520505 Version 1 (Component)Rbs-tetR(scarless)
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
BBa_J23008BBa_J23008 Version 1 (Component)[key3c] riboregulator for lock3 variants
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
BBa_K1520502BBa_K1520502 Version 1 (Component)Rbs-lacI(scarless)
CATBBa_C0100 Version 1 (Component)Enzyme, chloramphenicol acetyltransferase or CAT
BBa_K1520501BBa_K1520501 Version 1 (Component)Rbs-luxR(scarless)
BBa_K541501BBa_K541501 Version 1 (Component)Promoter Pveg, RBS spoVG and SacB signal peptide for B. subtilis
CmRBBa_J61000 Version 1 (Component)chloramphenicol resistance cassette
SacYBO_9297 Version 1 (Component) scarBBa_G0000 Version 1 (Component)SpeI/XbaI scar for RBS-CDS junctions
loxBBa_J61046 Version 1 (Component)[Lox] site for recombination
cmRBBa_P1004 Version 1 (Component)chloramphenicol resistance cassette
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
BBa_K322922BBa_K322922 Version 1 (Component)cat + sacB for BRIDGE: A biobrick compatible markerless recombineering method
BBa_J70304BBa_J70304 Version 1 (Component)constitutive cat cassette for Mesoplasma florum