SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

GFP report
BBa_E0240 Version 1 (Component)
GFP generator

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

BBa_J04450
BBa_J04450 Version 1 (Component)
RFP Coding Device

BBa_K582002
BBa_K582002 Version 1 (Component)
Complete Repeat/Spacer Region(1400 bp) of LMD 9

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

YFP
BBa_E0032 Version 1 (Component)
enhanced yellow fluorescent protein derived from A. victoria GFP

SEGA021
SEGA021 Version 1 (Component)
natural linear DNA.

SEGA022
SEGA022 Version 1 (Component)
natural linear DNA.

BBa_J56012
BBa_J56012 Version 1 (Component)
Invertible sequence of dna includes Ptrc promoter

spacer
BBa_B0040 Version 1 (Component)
Spacer.1 (generic)

GFP genera
BBa_E0840 Version 1 (Component)
GFP generator

OriTR
BBa_J01003 Version 1 (Component)
OriT-R (Origin of transfer for the R-plasmid nic region)

pSC101
BBa_I50041 Version 1 (Component)
pSC101 origin of replication, reverse

BBa_K582003
BBa_K582003 Version 1 (Component)
Cas 9 + Repeat/Spacer Region

dCas 9
BBa_K1051800 Version 1 (Component)
protein dCas9.Two mutations,D10A and H841A,from Cas9 gene without stop codon.

BBa_K1129007
BBa_K1129007 Version 1 (Component)
T4 Repeat/Spacer Region of T4 Bacteriophage

ccdB
BBa_K145151 Version 1 (Component)
ccdB coding region

BBa_K1129012
BBa_K1129012 Version 1 (Component)
T7 Repeat/Spacer Region of T7 Bacteriophage

BBa_K1129049
BBa_K1129049 Version 1 (Component)
T7 Repeat/Spacer 2 Region of T7 Bacteriophage

BBa_K1129047
BBa_K1129047 Version 1 (Component)
T4 Repeat/Spacer Region 2 of T4 Bacteriophage

BBa_E0430
BBa_E0430 Version 1 (Component)
EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)

BBa_K582000
BBa_K582000 Version 1 (Component)
500bp of Spacer/Repeat Region of the CRISPR genome present in Strep. thermophilus LMD9 strain

CII
BBa_K116602 Version 1 (Component)
CII coding region from λ phage

BBa_B0029
BBa_B0029 Version 1 (Component)
1 bp deletion from B0031

BBa_K1824889
BBa_K1824889 Version 1 (Component)
A Transcriptional Spacer Sequence

BBa_K2116090
BBa_K2116090 Version 1 (Component)
Spacer for BB assembly

BBa_K1129029
BBa_K1129029 Version 1 (Component)
T4 Repeat/Spacer Region under arabinose promoter

BBa_K1356001
BBa_K1356001 Version 1 (Component)
LMD-9 CRISPR 3 System

BBa_K1486000
BBa_K1486000 Version 1 (Component)
CpxR coding region

BBa_K137043
BBa_K137043 Version 1 (Component)
Regulatory SSM device: Promoter with (TA)9 repeat expressing GFP

BBa_K786030
BBa_K786030 Version 1 (Component)
T7-repeat-spacer-repeat-T7terminator

BBa_K315014
BBa_K315014 Version 1 (Component)
TetA (Optimized from bp 1 to 141)

lacI
BBa_Q04121 Version 1 (Component)
QPI (B0034.C0012.B0015.R0011)

BBa_K098997
BBa_K098997 Version 1 (Component)
cIts coding region

BBa_K315015
BBa_K315015 Version 1 (Component)
TetA gene (DeOptimized from bp 1 to 141)

BBa_J09855
BBa_J09855 Version 1 (Component)
Constitutive luxR device with pLuxR

BBa_K1763434
BBa_K1763434 Version 1 (Component)
MaSp1-9(1C3)

mt ori7
BBa_K809002 Version 1 (Component)
ori7 region of mtDNA

BBa_I13401
BBa_I13401 Version 1 (Component)
GFP reporter for RHS of library test constructs