SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
pSB1C3pSB1C3 Version 1 (Component)High copy BioBrick assembly plasmid
LacIBBa_R0010 Version 1 (Component)promoter (lacI regulated)
lacIBBa_C0012 Version 1 (Component)lacI repressor from E. coli (+LVA)
lacI+pLBBa_R0011 Version 1 (Component)Promoter (lacI regulated, lambda pL hybrid)
P(Lac) IQBBa_I14032 Version 1 (Component)promoter P(Lac) IQ
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
LacILacI Version 1 (Component) cI lamBBa_C0051 Version 1 (Component)cI repressor from E. coli phage lambda (+LVA)
cI lamBBa_R0051 Version 1 (Component)promoter (lambda cI regulated)
pSB1AT3pSB1AT3 Version 1 (Component)High copy BioBrick assembly plasmid
pSB1A2pSB1A2 Version 1 (Component)pSB1A2 (Replaced by pSB1A3)
BBa_J33207BBa_J33207 Version 1 (Component)lac promoter and lacZ
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
BBa_K1222983BBa_K1222983 Version 1 (Component)Lac operator+CamR antisense 2/pSB1C3
pLacBBa_K1638000 Version 1 (Component)Lac operator
lacZ-alphaBBa_I732006 Version 1 (Component)lacZ alpha fragment
BBa_K731500BBa_K731500 Version 1 (Component)[LacI + LacIq promoter] reverse + [tac promoter + lac operator] forward
BBa_K314103BBa_K314103 Version 1 (Component)Lac induced expression cassette
pSB1AK3pSB1AK3 Version 1 (Component)High copy BioBrick assembly plasmid
lacIBBa_Q04121 Version 1 (Component)QPI (B0034.C0012.B0015.R0011)
BBa_K864400BBa_K864400 Version 1 (Component)Ptac, trp & lac regulated promoter
BBa_K1222980BBa_K1222980 Version 1 (Component)Pcam(I719005+lac operator+CamR antisense 2+K731721)/PSB1C3
BBa_K1222978BBa_K1222978 Version 1 (Component)pcam(I719005+lac operator+CamR antisense 2+K731721)/PSB1C3
BBa_K079019BBa_K079019 Version 1 (Component)Lac 2 - operator library member
LacIBBa_I732100 Version 1 (Component)LacI
BBa_K1222986BBa_K1222986 Version 1 (Component)Lac operator+GFP antisense 2/pSB1C3
BBa_K1222982BBa_K1222982 Version 1 (Component)Lac operator+CamR antisense 3/pSB1C3
BBa_K1222984BBa_K1222984 Version 1 (Component)Lac operator+CamR antisense 1/pSB1C3
BBa_K1222981BBa_K1222981 Version 1 (Component)Lac operator+CamR antisense 4/pSB1C3
pSB1K3pSB1K3 Version 1 (Component)High copy BioBrick assembly plasmid
BBa_K1222977BBa_K1222977 Version 1 (Component)pcam(I719005+lac operator+CamR antisense 2+K731721)/PSB1C3
BBa_K1222992BBa_K1222992 Version 1 (Component)CamR antisense 2/pSB1C3
pSB1A3pSB1A3 Version 1 (Component)High copy BioBrick assembly plasmid
pSB1AC3pSB1AC3 Version 1 (Component)High copy BioBrick assembly plasmid
BBa_K233004BBa_K233004 Version 1 (Component)lac operator
pSB1T3pSB1T3 Version 1 (Component)High copy BioBrick assembly plasmid
pSB4C1pSB4C1 Version 1 (Component)pCK01 converted into BioBrick vector (formerly BBa_I739202)
pSB1C4pSB1C4 Version 1 (Component)High copy BioBrick assembly plasmid
BBa_K1222985BBa_K1222985 Version 1 (Component)Lac operator+GFP antisense 3/pSB1C3
CymRBO_9077 Version 1 (Component) pSB3K3pSB3K3 Version 1 (Component)Low to medium copy BioBrick standard vector
pSB4A3pSB4A3 Version 1 (Component)pSB4A3 (Replaced by pSB4A5)
pSB2K3pSB2K3 Version 1 (Component)Inducible copy number BioBrick plasmid
LacZBBa_I732005 Version 1 (Component)lacZ (encoding beta-galactosidase, full-length)
LacYBBa_K137001 Version 1 (Component)LacY
BBa_J52008BBa_J52008 Version 1 (Component)luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)
pSB1A1pSB1A1 Version 1 (Component)pUC19 with a BioBrick cloning site (Replaced by pSB1A3)