Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

iGEM Feature Libraries
igem_feature_libraries_collection Version 1 (Unknown)
A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

Free Genes Feature Libraries
free_genes_feature_libraries_collection Version 1 (Unknown)
A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).

ACS Synbio Generation
ACS_Synbio_Generation Version 1 (Activity)
Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project

iGEM to SBOL conversion
igem2sbol Version 1 (Activity)
Conversion of the iGEM parts registry to SBOL2.1

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

Sequence Cut Out of Plasmid
cut_out_of_plasmid Version 1 (Activity)
Used to indicate that a sequence was cut out of the plasmid referenced as the source

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

Unknown Alteration Sequence Pull
Unknown Version 1 (Activity)
Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown

mRFP1
BBa_E1010 Version 1 (Component)
**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

BBa_K1676079
BBa_K1676079 Version 1 (Component)
Mutant 3 of LDH and wildtype LDP

BBa_J56012
BBa_J56012 Version 1 (Component)
Invertible sequence of dna includes Ptrc promoter

BBa_K2066019
BBa_K2066019 Version 1 (Component)
UNS 3 Sequence, from Torella et al., 2013

BBa_K1676096
BBa_K1676096 Version 1 (Component)
Mutant 20 of LDH and wildtype LDP

BBa_K1676082
BBa_K1676082 Version 1 (Component)
Mutant 6 of LDH and wildtype LDP

BBa_K1676078
BBa_K1676078 Version 1 (Component)
Mutant 2 of LDH and wildtype LDP

BBa_K1676083
BBa_K1676083 Version 1 (Component)
Mutant 7 of LDH and wildtype LDP

BBa_K1676094
BBa_K1676094 Version 1 (Component)
Mutant 18 of LDH and wildtype LDP

BBa_K1676095
BBa_K1676095 Version 1 (Component)
Mutant 19 of LDH and wildtype LDP

BBa_K1676085
BBa_K1676085 Version 1 (Component)
Mutant 9 of LDH and wildtype LDP

BBa_K1676087
BBa_K1676087 Version 1 (Component)
Mutant 11 of LDH and wildtype LDP

BBa_K1676092
BBa_K1676092 Version 1 (Component)
Mutant 16 of LDH and wildtype LDP

BBa_K1676084
BBa_K1676084 Version 1 (Component)
Mutant 8 of LDH and wildtype LDP

BBa_K1676090
BBa_K1676090 Version 1 (Component)
Mutant 14 of LDH and wildtype LDP

BBa_K1676093
BBa_K1676093 Version 1 (Component)
Mutant 17 of LDH and wildtype LDP

BBa_K1676089
BBa_K1676089 Version 1 (Component)
Mutant 13 of LDH and wildtype LDP

BBa_K1676077
BBa_K1676077 Version 1 (Component)
Mutant 1 of LDH and wildtype LDP

BBa_K1676081
BBa_K1676081 Version 1 (Component)
Mutant 5 of LDH and wildtype LDP

Prm +
BBa_I12007 Version 1 (Component)
Modified lambda Prm promoter (OR-3 obliterated)

pSC101
BBa_I50041 Version 1 (Component)
pSC101 origin of replication, reverse

BBa_J202002
BBa_J202002 Version 1 (Component)
PBAD Mutant#3

BBa_K1676088
BBa_K1676088 Version 1 (Component)
Mutant 12 of LDH and wildtype LDP

BBa_K1676091
BBa_K1676091 Version 1 (Component)
Mutant 15 of LDH and wildtype LDP

BBa_K1676086
BBa_K1676086 Version 1 (Component)
Mutant 10 of LDH and wildtype LDP

BBa_K1676080
BBa_K1676080 Version 1 (Component)
Mutant 4 of LDH and wildtype LDP

BBa_K1882002
BBa_K1882002 Version 1 (Component)
LDH Promotor

BBa_K1882007
BBa_K1882007 Version 1 (Component)
LDH-Promotor

D-LDH*
BBa_K2042008 Version 1 (Component)
Engineered D-Lactate dehydrogenase (D-LDH*)

BBa_K1882001
BBa_K1882001 Version 1 (Component)
LDH Promotor-Phosphofructokinase

BBa_K2042015
BBa_K2042015 Version 1 (Component)
LDH* Generator

BBa_K2042018
BBa_K2042018 Version 1 (Component)
Scar before LDH*constitutive promoter