SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
pT7BBa_I719005 Version 1 (Component)T7 Promoter
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
BBa_I712074BBa_I712074 Version 1 (Component)T7 promoter (strong promoter from T7 bacteriophage)
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
SpacerSpacer Version 1 (Component) pT7BBa_K525998 Version 1 (Component)Promoter T7 and RBS
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
GFP reportBBa_E0240 Version 1 (Component)GFP generator
spaRSpaR Version (Component) BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
BBa_B0016BBa_B0016 Version 1 (Component)Terminator (T7 RNAP specific, T_Phi)
T7 RBSBBa_K1362090 Version 1 (Component)strong T7 RBS
BBa_K1321338BBa_K1321338 Version 1 (Component)T7 Expression vector
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_I2032BBa_I2032 Version 1 (Component)T7 RNA polymerase
BBa_K2066018BBa_K2066018 Version 1 (Component)UNS 2 Sequence, from Torella et al., 2013
YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
BBa_K199118BBa_K199118 Version 1 (Component)T7 promoter + RBS + RFP
SEGA021SEGA021 Version 1 (Component)natural linear DNA.
SEGA022SEGA022 Version 1 (Component)natural linear DNA.
BBa_K1129049BBa_K1129049 Version 1 (Component)T7 Repeat/Spacer 2 Region of T7 Bacteriophage
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
BBa_K1129012BBa_K1129012 Version 1 (Component)T7 Repeat/Spacer Region of T7 Bacteriophage
spacerBBa_B0040 Version 1 (Component)Spacer.1 (generic)
BBa_R0085BBa_R0085 Version 1 (Component)T7 Consensus Promoter Sequence
GFP generaBBa_E0840 Version 1 (Component)GFP generator
BBa_B0013BBa_B0013 Version 1 (Component)TE from coliphage T7 (+/-)
BBa_R0182BBa_R0182 Version 1 (Component)T7 RNAP promoter
OriTRBBa_J01003 Version 1 (Component)OriT-R (Origin of transfer for the R-plasmid nic region)
BBa_K1129047BBa_K1129047 Version 1 (Component)T4 Repeat/Spacer Region 2 of T4 Bacteriophage
T7stopBBa_J18913 Version 1 (Component)T7 terminator (incl. STOP)
BBa_K1129007BBa_K1129007 Version 1 (Component)T4 Repeat/Spacer Region of T4 Bacteriophage
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
T7startBBa_J18912 Version 1 (Component)T7 promoter + RBS + START
T7BBa_K145014 Version 1 (Component)T7 RNA Polymerase with UmuD derived tag
BBa_K786030BBa_K786030 Version 1 (Component)T7-repeat-spacer-repeat-T7terminator
BBa_R0184BBa_R0184 Version 1 (Component)T7 promoter (lacI repressible)
BBa_K784002BBa_K784002 Version 1 (Component)T7 Terminator
BBa_K731721BBa_K731721 Version 1 (Component)T7 terminator
BBa_J52008BBa_J52008 Version 1 (Component)luciferase: luciferin 2-monooxygenase from Renilla reniformis (EC 1.13.12.5; SwissProt:: P27652)
BBa_K1763439BBa_K1763439 Version 1 (Component)MaSp1/2[2:1]-12(T7)
BBa_K1763443BBa_K1763443 Version 1 (Component)MaSp1/2[1:2]-12(T7)