iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Sequence Cut Out of Plasmidcut_out_of_plasmid Version 1 (Activity)Used to indicate that a sequence was cut out of the plasmid referenced as the source
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
CD4 signalBBa_I712009 Version 1 (Component)CD4 signal peptide; localizes to plasma membrane
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
BBa_J56012BBa_J56012 Version 1 (Component)Invertible sequence of dna includes Ptrc promoter
SPzim17BBa_K809201 Version 1 (Component)signal peptide of ZIM17
FurBO_11498 Version 1 (Component) BBa_J36835BBa_J36835 Version 1 (Component)Lipoprotein signal peptide
rrnOrrnO_ter Version (Component) mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
pSC101BBa_I50041 Version 1 (Component)pSC101 origin of replication, reverse
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
SPferBBa_K809202 Version 1 (Component)signal peptide of FER
BBa_K554002BBa_K554002 Version 1 (Component)HlyA secretion signal peptide
BBa_I13401BBa_I13401 Version 1 (Component)GFP reporter for RHS of library test constructs
SPtom70BBa_K809205 Version 1 (Component)signal peptide of Tom70
SPtom40BBa_K809204 Version 1 (Component)signal peptide of Tom40
BBa_K880005BBa_K880005 Version 1 (Component)Strong promoter, strong RBS combination for high expression levels of proteins
TerTer Version (Component) hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
SPtom22BBa_K809206 Version 1 (Component)signal peptide of Tom22
RFY_SPferBBa_K809302 Version 1 (Component)RFP + signal peptide of FER
YFP_SPferBBa_K809314 Version 1 (Component)YFP + signal peptide of FER
BBa_K541526BBa_K541526 Version 1 (Component)reflectin for b.subtilis with LipA signal peptide
BBa_K1592000BBa_K1592000 Version 1 (Component)LIP2 prepro(signal peptide)
BBa_K1351008BBa_K1351008 Version 1 (Component)Signal peptide of B. subtilis endonuclease YhcR
BBa_M36726BBa_M36726 Version 1 (Component)Type II Signal Peptide
BBa_K1159303BBa_K1159303 Version 1 (Component)Signal Peptide of SERK Receptor from <i>Physcomitrella patens</i> in RFC[25]
BBa_K1351026BBa_K1351026 Version 1 (Component)Signal peptide of B. subtilis major autolysin LytC
BBa_K1351027BBa_K1351027 Version 1 (Component)Signal peptide of B. subtilis minor autolysin LytE
BBa_I712010BBa_I712010 Version 1 (Component)CD4 sequence without signal peptide
BBa_K208003BBa_K208003 Version 1 (Component)OmpA Signal Peptide - Silver Fusion Compatible
BBa_K208004BBa_K208004 Version 1 (Component)PelB Signal Peptide - Silver Fusion Compatible
BBa_K541501BBa_K541501 Version 1 (Component)Promoter Pveg, RBS spoVG and SacB signal peptide for B. subtilis
BBa_K809301BBa_K809301 Version 1 (Component)RFP + signal peptide of ZIM17