URA5GenBank_CM000046_Region_302227_303005 Version 1 (Unknown)Organism: Cryptococcus neoformans var. neoformans B-3501A
URA5GenBank_CM000046_Region_301512_302226 Version 1 (Unknown)Organism: Cryptococcus neoformans var. neoformans B-3501A
URA5GenBank_CM000046_Region_303006_303540 Version 1 (Unknown)Organism: Cryptococcus neoformans var. neoformans B-3501A
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
BBa_J61101BBa_J61101 Version 1 (Component)Ribosome Binding Site Family Member
BBa_B0031BBa_B0031 Version 1 (Component)RBS.2 (weak) -- derivative of BBa_0030
BBa_J61120BBa_J61120 Version 1 (Component)Ribosome Binding Site Family Member
BBa_I742138BBa_I742138 Version 1 (Component)B-carotene (organge pigment) producing operon without PstI sites
Restriction_sitesRestriction_sites Version 1 (Component)SacI - KpnI - SmaI - BamHI - XbaI - SalI - PstI - SphI - HindIII - NotI
BBa_I742121BBa_I742121 Version 1 (Component)B-carotene (orange pigment) producing operon
BBa_B0033BBa_B0033 Version 1 (Component)RBS.4 (weaker) -- derivative of BBa_0030
araCBBa_C0080 Version 1 (Component)araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)
BBa_I742136BBa_I742136 Version 1 (Component)Lycopene (red pigment) producing operon without PstI sites
RBS-spoVGBBa_K143021 Version 1 (Component)SpoVG ribosome binding site (RBS) for B. subtilis
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_J61100BBa_J61100 Version 1 (Component)Ribosome Binding Site Family Member
BBa_I742139BBa_I742139 Version 1 (Component)Zeaxanthin (yellow pigment) synthesis operon without PstI sites
tetA(C)bBBa_J31006 Version 1 (Component)tetracycline resistance protein TetA(C) (backwards) [cf. BBa_J31007]
BBa_J85600BBa_J85600 Version 1 (Component)attB1 recombination site
BBa_K322123BBa_K322123 Version 1 (Component)Phycobilin synthesis operon without terminator
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BBa_K2180005BBa_K2180005 Version 1 (Component)Pigment Blue for B. subtilis with a LVA tail and restriction site (Blue Pigment)
BBa_I13458BBa_I13458 Version 1 (Component)promoter C and arabinose C operon
BBa_I742120BBa_I742120 Version 1 (Component)Lycopene (red pigment) producing operon
rbs+crtZBBa_I742158 Version 1 (Component)crtZ (beta-carotene hydroxylase) with native rbs
BBa_K809601BBa_K809601 Version 1 (Component)GAL promoter (kozak) without start codon ATG
ninaBBBa_K343001 Version 1 (Component)B-carotene monooxygenase, Produces retinal from B-carotene. ninaB gene from Drosophila.
BBa_K1497007BBa_K1497007 Version 1 (Component)Naringenin producing operon
BBa_I766216BBa_I766216 Version 1 (Component)Combinatorial Cloning B Site
Pveg-spoVGBBa_K143053 Version 1 (Component)Promoter Pveg and RBS spoVG for B. subtilis
BBa_I13457BBa_I13457 Version 1 (Component)Improved insertion site with two RNAse E cut sites
BBa_K117000BBa_K117000 Version 1 (Component)Lysis gene (promotes lysis in colicin-producing bacteria strain)
BBa_K209400BBa_K209400 Version 1 (Component)AarI B-C part, hM4D
B-caroteneBBa_K343006 Version 1 (Component)Expresses B-carotene monooxygenase on a constitutive promotor
PvegBBa_K143012 Version 1 (Component)Promoter veg a constitutive promoter for B. subtilis
RBS-GsiBBBa_K143020 Version 1 (Component)GsiB ribosome binding site (RBS) for B. subtilis
BBa_K1638016BBa_K1638016 Version 1 (Component)8 aa linker without BamHI restriction site and TEV recognition site
BBa_K1650054BBa_K1650054 Version 1 (Component)Promoter for Carotene operon
BBa_K2180019BBa_K2180019 Version 1 (Component)Blue Pigment for B. subtilis
RBS_cassetteRBS_cassette Version 1 (Component)AvrII restriction site (cctagg), overlapped with RBS (aggagga)
BBa_I742133BBa_I742133 Version 1 (Component)CrtIB genes with PstI site mutated out
PstIBBa_K300981 Version 1 (Component)PstI restriction enzyme site
BBa_I742122BBa_I742122 Version 1 (Component)Zeaxanthin (yellow pigment) synthesis operon