SynBioHub

Public

SyBiOntKB to SBOL conversion
SyBiOntKB2sbol Version 1 (Activity)
Conversion of the Synthetic Biology Ontology knowledge base to SBOL 2.1

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BBa_B0012
BBa_B0012 Version 1 (Component)
TE from coliphageT7

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BBa_B0015
BBa_B0015 Version 1 (Component)
double terminator (B0010-B0012)

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BBa_B0010
BBa_B0010 Version 1 (Component)
T1 from E. coli rrnB

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SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

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LacI
BBa_R0010 Version 1 (Component)
promoter (lacI regulated)

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pBad/araC
BBa_I0500 Version 1 (Component)
Inducible pBad/araC promoter

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BBa_B0014
BBa_B0014 Version 1 (Component)
double terminator (B0012-B0011)

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BBa_B0032
BBa_B0032 Version 1 (Component)
RBS.3 (medium) -- derivative of BBa_0030

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lacI+pL
BBa_R0011 Version 1 (Component)
Promoter (lacI regulated, lambda pL hybrid)

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BBa_I13453
BBa_I13453 Version 1 (Component)
Pbad promoter

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BBa_B0011
BBa_B0011 Version 1 (Component)
LuxICDABEG (+/-)

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pBAD
BBa_K206000 Version 1 (Component)
pBAD strong

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lux pR
BBa_R0062 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pR)

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cI lam
BBa_R0051 Version 1 (Component)
promoter (lambda cI regulated)

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Scar 25
BBa_B0105 Version 1 (Component)
RFC 25 Scar Sequence

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BBa_J61101
BBa_J61101 Version 1 (Component)
Ribosome Binding Site Family Member

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BBa_B0010_sequence
BBa_B0010_sequence Version 1 (Sequence)

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BBa_B0012_sequence
BBa_B0012_sequence Version 1 (Sequence)

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BBa_B0025
BBa_B0025 Version 1 (Component)
double terminator (B0015), reversed

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BBa_B0031
BBa_B0031 Version 1 (Component)
RBS.2 (weak) -- derivative of BBa_0030

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BBa_K598019
BBa_K598019 Version 1 (Component)
B0015+pBAD+vioABD+B0015+pBAD+TPP Down-regulated Hammerhead Ribozyme 2.5+vioE

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BBa_K598020
BBa_K598020 Version 1 (Component)
B0015+pBAD+vioAB+B0015+pBAD+TPP Up-regulated Hammerhead Ribozyme 1.20+vioD+B0015+pBAD+vioE

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BBa_B0015_sequence
BBa_B0015_sequence Version 1 (Sequence)

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BBa_J61120
BBa_J61120 Version 1 (Component)
Ribosome Binding Site Family Member

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BBa_B0024
BBa_B0024 Version 1 (Component)
double terminator (B0012-B0011), reversed

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BBa_B0016
BBa_B0016 Version 1 (Component)
Terminator (T7 RNAP specific, T_Phi)

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BBa_E0430
BBa_E0430 Version 1 (Component)
EYFP (RBS+ LVA- TERM) (B0034.E0030.B0015)

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BBa_K864400
BBa_K864400 Version 1 (Component)
Ptac, trp & lac regulated promoter

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lacI
BBa_Q04121 Version 1 (Component)
QPI (B0034.C0012.B0015.R0011)

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LasR+PAI
BBa_R0079 Version 1 (Component)
Promoter (LasR & PAI regulated)

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BBa_K598011
BBa_K598011 Version 1 (Component)
pBAD+TPP Down-regulated Hammerhead Ribozyme 2.5 with Native RBS+E0040+B0015

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BBa_B0017
BBa_B0017 Version 1 (Component)
double terminator (B0010-B0010)

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tetR
BBa_Q04400 Version 1 (Component)
QPI (B0034.C0040.B0015.R0040)

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cI+luxR
BBa_R0065 Version 1 (Component)
Promoter (lambda cI and luxR regulated -- hybrid)

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BBa_K598000
BBa_K598000 Version 1 (Component)
TPP Down-regulated Hammerhead Ribozyme 2.5 with Native RBS+E0040+B0015

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BBa_Q04510
BBa_Q04510 Version 1 (Component)
QPI (B0034.C0051.B0015.R0051)

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BBa_B0033
BBa_B0033 Version 1 (Component)
RBS.4 (weaker) -- derivative of BBa_0030

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BBa_B0035
BBa_B0035 Version 1 (Component)
RBS (B0030 derivative)

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BBa_K598003
BBa_K598003 Version 1 (Component)
TPP Down-regulated Hammerhead Ribozyme 2.5 with Native RBS

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Ara
BBa_K808000 Version 1 (Component)
araC-Pbad - Arabinose inducible regulatory promoter/repressor unit

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BBa_K823017
BBa_K823017 Version 1 (Component)
double terminator (B0012-B0011)

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BBa_K598012
BBa_K598012 Version 1 (Component)
pBAD+TPP Up-regulated Hammerhead Ribozyme 1.20 with Native RBS+E0040+B0015

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lux pL
BBa_R0063 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pL)<br>

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BBa_E0422
BBa_E0422 Version 1 (Component)
ECFP (RBS+ LVA+ TERM) (B0034.E0022.B0015)

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vioD
vioD Version (Component)

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vioB
vioB Version (Component)

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vioA
vioA Version (Component)

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BBa_J61100
BBa_J61100 Version 1 (Component)
Ribosome Binding Site Family Member

Public

BBa_E0420
BBa_E0420 Version 1 (Component)
ECFP (RBS+ LVA- TERM) (B0034.E0020.B0015)

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