iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Reverse Orientation Sequence Pullreverse_orientation Version 1 (Activity)Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
pSB1C3pSB1C3 Version 1 (Component)High copy BioBrick assembly plasmid
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
BBa_P10598BBa_P10598 Version 1 (Component)GoldenBraid destination vector omega insert
BBa_P10599BBa_P10599 Version 1 (Component)GoldenBraid destination vector alpha insert
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_K1321338BBa_K1321338 Version 1 (Component)T7 Expression vector
BB base veBBa_I51020 Version 1 (Component)BioBrick base vector (for constructing pSB**5 vectors)
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
pSB1AT3pSB1AT3 Version 1 (Component)High copy BioBrick assembly plasmid
BBa_J61002BBa_J61002 Version 1 (Component)EX-Ptet-S-rbsRFP-P "RFP reporter"
FurBO_11498 Version 1 (Component) hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K209399BBa_K209399 Version 1 (Component)AarI A-D acceptor vector
BBa_J64100BBa_J64100 Version 1 (Component)Medium copy ColE1 BioBrick vector
PBS_F24PBS_F24 Version 1 (Component) pSB1A2pSB1A2 Version 1 (Component)pSB1A2 (Replaced by pSB1A3)
BBa_I13452BBa_I13452 Version 1 (Component)Adds another BioBrick site
pTG262-BBBBa_I742123 Version 1 (Component)Multi-host vector pTG262 converted to BioBrick vector
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_K415508BBa_K415508 Version 1 (Component)phEF1a L4R1 MammoBlock Entry Vector
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K1321300BBa_K1321300 Version 1 (Component)pSEVA331-Bb - pSEVA331 with biobrick prefix and suffix
BBa_K300001BBa_K300001 Version 1 (Component)BioBrick integrative base vector for S. cerevisiae
BBa_K300000BBa_K300000 Version 1 (Component)BioBrick integrative base vector for E. coli
BBa_I51000BBa_I51000 Version 1 (Component)BioBrick base vector, as originally designed
BBa_K1365301BBa_K1365301 Version 1 (Component)pIL253-mRFP Biobrick Vector for L.lactis
pSB4C1pSB4C1 Version 1 (Component)pCK01 converted into BioBrick vector (formerly BBa_I739202)
BBa_K864004BBa_K864004 Version 1 (Component)Low copy BioBrick standard vector
BBa_K864006BBa_K864006 Version 1 (Component)Low copy BioBrick standard vector
BBa_K864005BBa_K864005 Version 1 (Component)Low copy BioBrick standard vector
BBa_K864000BBa_K864000 Version 1 (Component)Low copy BioBrick standard vector
BBa_K864002BBa_K864002 Version 1 (Component)Low copy BioBrick standard vector
BBa_K864007BBa_K864007 Version 1 (Component)Low copy BioBrick standard vector
BBa_K864003BBa_K864003 Version 1 (Component)Low copy BioBrick standard vector
BBa_K864001BBa_K864001 Version 1 (Component)Low copy BioBrick standard vector
VF2BBa_G00100 Version 1 (Component)Forward primer for sequencing/amplifying BioBrick parts (VF2)
VR2BBa_J18907 Version 1 (Component)VR2: Reverse Primer to pSB1 Biobrick Vectors (optimized VR)
pSB3K3pSB3K3 Version 1 (Component)Low to medium copy BioBrick standard vector