mCherrymCherry Version 1 (Unknown)Organism: Cryptococcus neoformans serotype A H99S strain
iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Codon Optimised Sequence Pullcodon_optimisation Version 1 (Activity)Used to indicate that a sequence was codon optimised after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
GC Optimised Sequence PullGC_Optimised Version 1 (Activity)Used to indicate that a sequence was GC optimised after pulling from the source and before submission
mCherryBBa_J06702 Version 1 (Component)mCherry, bacterial with RBS and forward terminator
FurBO_11498 Version 1 (Component) mCherryBBa_J06505 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K2136016BBa_K2136016 Version 1 (Component)Codon optimized mCherry for Chlamydomonas reinhardtii
mCherryBBa_K165004 Version 1 (Component)mCherry, yeast optimized for fusion
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_K2074019BBa_K2074019 Version 1 (Component)Terminator of Chlamydomonas reinhardtii
mCherryBBa_E2060 Version 1 (Component)derivative of mRFP1, yeast-optimized
BBa_J70029BBa_J70029 Version 1 (Component)RBS + mCherry gene, optimized for expression in Me. florum and E. coli
BBa_K773003BBa_K773003 Version 1 (Component)mCherry-LVA
yfpBBa_K165005 Version 1 (Component)Venus YFP, yeast optimized for fusion
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K2074015BBa_K2074015 Version 1 (Component)TaV 2A for Chlamydomonas reinhardtii
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K1491017BBa_K1491017 Version 1 (Component)Codon Optimized Supernova
BBa_K1491015BBa_K1491015 Version 1 (Component)Codon Optimized KillerRed
BBa_I766101BBa_I766101 Version 1 (Component)mCherry/RFP
BBa_K2066518BBa_K2066518 Version 1 (Component)mCherry (with start codon)
BBa_S03483BBa_S03483 Version 1 (Component)Chlamydomonas reinhardtii chloroplast
BBa_K535001BBa_K535001 Version 1 (Component)HydG-> Chlamydomonas reinhardtii
InteinBBa_K300004 Version 1 (Component)Engineered pH-inducible intein (codon optimized for E. coli) - internal domain
BBa_K2074998BBa_K2074998 Version 1 (Component)cry11Aa suit for Chlamydomonas reinhardti
zif23BBa_C2001 Version 1 (Component)Zif23-GCN4 engineered repressor (+LVA, C2000 codon-optimized for E.coli)
BBa_K2074014BBa_K2074014 Version 1 (Component)Extended FMDV 2A for Chlamydomonas reinhardtii
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_K640001BBa_K640001 Version 1 (Component)Hsp70A/RbcS2 Promoter from Chlamydomonas reinhardtii
BBa_K640007BBa_K640007 Version 1 (Component)Codon optimized Luciferase for chlamydomonas with Hsp70A promoter
BBa_K801080BBa_K801080 Version 1 (Component)Prepro-Thaumatin, yeast codon optimized
BBa_K596001BBa_K596001 Version 1 (Component)Nitroreductase optimized for C.reinhardtii
BBa_K2074997BBa_K2074997 Version 1 (Component)Cry4Aa and Cyt2 Coexpression in Chlamydomonas reinhardtii
BBa_K953004BBa_K953004 Version 1 (Component)Hemeoxygenase with RBS (E. coli Codon Optimised)
BBa_K531006BBa_K531006 Version 1 (Component)Optimized esp gene for <i>C. crescentus</i>
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
mCherryBBa_J18932 Version 1 (Component)mCherry RFP