GFPGFP Version 1 (Unknown)Organism: Cryptococcus neoformans serotype A H99S
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Reverse Orientation Sequence Pullreverse_orientation Version 1 (Activity)Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
GFPBBa_E0040 Version 1 (Component)green fluorescent protein derived from jellyfish Aequeora victoria wild-type GFP (SwissProt: P42212
BBa_B0032BBa_B0032 Version 1 (Component)RBS.3 (medium) -- derivative of BBa_0030
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
mRFP1BBa_E1010 Version 1 (Component)**highly** engineered mutant of red fluorescent protein from Discosoma striata (coral)
pT7BBa_I719005 Version 1 (Component)T7 Promoter
BBa_J04450BBa_J04450 Version 1 (Component)RFP Coding Device
pT7BBa_K525998 Version 1 (Component)Promoter T7 and RBS
GFP reportBBa_E0240 Version 1 (Component)GFP generator
eyfpBBa_E0030 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
GFP1BBa_I715019 Version 1 (Component)Amino Half of GFP (aka GFP1)
RFP1BBa_I715022 Version 1 (Component)Amino Portion of RFP
GFP generaBBa_E0840 Version 1 (Component)GFP generator
YFPBBa_E0032 Version 1 (Component)enhanced yellow fluorescent protein derived from A. victoria GFP
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_I712074BBa_I712074 Version 1 (Component)T7 promoter (strong promoter from T7 bacteriophage)
BBa_I715048BBa_I715048 Version 1 (Component)Hin + pT7 -> RFP1 + GFP1 medium initial orientation
BBa_I715050BBa_I715050 Version 1 (Component)Hin + pT7 -> RFP1 + GFP1 medium initial orientation
ecfpBBa_E0020 Version 1 (Component)engineered cyan fluorescent protein derived from A. victoria GFP
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
mRFP1BBa_I13502 Version 1 (Component)Screening plasmid intermediate
RFP2BBa_I715023 Version 1 (Component)Carboxyl portion of RFP
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
ECFPBBa_E0022 Version 1 (Component)enhanced cyan fluorescent protein derived from A. victoria GFP
BBa_K199118BBa_K199118 Version 1 (Component)T7 promoter + RBS + RFP
BBa_K608006BBa_K608006 Version 1 (Component)medium Promoter , medium RBS
BBa_I766555BBa_I766555 Version 1 (Component)pCyc (Medium) Promoter
HinBBa_J31000 Version 1 (Component)DNA-invertase Hin from Salmonella typhimurium
mRFP1BBa_E2050 Version 1 (Component)derivative of mRFP1, yeast-optimized
BBa_K081014BBa_K081014 Version 1 (Component)RFP protein generator - PoPS->RFP
GFP2BBa_I715020 Version 1 (Component)Carboxyl Half of GFP (aka GFP2)
BBa_B0016BBa_B0016 Version 1 (Component)Terminator (T7 RNAP specific, T_Phi)
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K199176BBa_K199176 Version 1 (Component)pT7+RBS+GFP
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
difFBBa_I742101 Version 1 (Component)dif site with forward orientation
GFPBBa_K145015 Version 1 (Component)GFP with LVA tag
difRBBa_I742102 Version 1 (Component)dif site with reverse orientation
BBa_K567018BBa_K567018 Version 1 (Component)PT7-GFP-TAG-RFP
BBa_I746916BBa_I746916 Version 1 (Component)superfolder GFP coding sequence
BBa_K608007BBa_K608007 Version 1 (Component)medium Promoter , weak RBS