iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
Direct Sequence Pulldirect Version 1 (Activity)Used to indicate that a sequence was pulled directly from a source with no alterations made
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Sequence Pull with Mutationsmutations Version 1 (Activity)Used to indicate that a sequence had mutations added after pulling from the source and before submission
BBa_B0030BBa_B0030 Version 1 (Component)RBS.1 (strong) -- modified from R. Weiss
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
GAL1BBa_J63006 Version 1 (Component)yeast GAL1 promoter
CD4 signalBBa_I712009 Version 1 (Component)CD4 signal peptide; localizes to plasma membrane
BBa_K351004BBa_K351004 Version 1 (Component)Modified Human FGF receptor for MPT51 antigen with fission yeast surface signal peptide
BBa_J04500BBa_J04500 Version 1 (Component)IPTG inducible promoter with RBS
Prm +BBa_I12007 Version 1 (Component)Modified lambda Prm promoter (OR-3 obliterated)
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K351005BBa_K351005 Version 1 (Component)Normal Human FGF receptor with fission yeast surface signal peptide
FurBO_11498 Version 1 (Component) yfpBBa_K165005 Version 1 (Component)Venus YFP, yeast optimized for fusion
BBa_K165002BBa_K165002 Version 1 (Component)Kozak sequence (yeast RBS)
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
BBa_J36835BBa_J36835 Version 1 (Component)Lipoprotein signal peptide
BBa_K801012BBa_K801012 Version 1 (Component)ADH1 yeast terminator
BBa_K351003BBa_K351003 Version 1 (Component)Normal Human FGF receptor with human plasma membrane signal peptide
mCherryBBa_K165004 Version 1 (Component)mCherry, yeast optimized for fusion
SPzim17BBa_K809201 Version 1 (Component)signal peptide of ZIM17
BBa_K208006BBa_K208006 Version 1 (Component)HlyA Signal Peptide - Silver Fusion Compatible
BBa_K351000BBa_K351000 Version 1 (Component)Signal peptide for cell surface of fission yeast
Prm +BBa_I12006 Version 1 (Component)Modified lamdba Prm promoter (repressed by 434 cI)
BBa_K209402BBa_K209402 Version 1 (Component)AarI A-B part, signal sequence-FLAG-YFP [SSFYFP]
BLpBBa_K238013 Version 1 (Component)Exact promoter of the blue light receptor
BBa_K541526BBa_K541526 Version 1 (Component)reflectin for b.subtilis with LipA signal peptide
BBa_K351007BBa_K351007 Version 1 (Component)first Ig-like region of Human basic FGFR with signal peptide for s.pombe surface
BBa_J64101BBa_J64101 Version 1 (Component)ColE1 biobrick plasmid with backward terminator
BBa_K165010BBa_K165010 Version 1 (Component)ADH1 yeast transcription terminator
BBa_K208003BBa_K208003 Version 1 (Component)OmpA Signal Peptide - Silver Fusion Compatible
BBa_K208004BBa_K208004 Version 1 (Component)PelB Signal Peptide - Silver Fusion Compatible
BBa_K777000BBa_K777000 Version 1 (Component)Tar receptor
BBa_K1159303BBa_K1159303 Version 1 (Component)Signal Peptide of SERK Receptor from <i>Physcomitrella patens</i> in RFC[25]
BBa_K208005BBa_K208005 Version 1 (Component)TorA Signal Peptide - Silver Fusion Compatible
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_J15001BBa_J15001 Version 1 (Component)strong synthetic E. coli ribosome binding site with SacI site.
BBa_K208002BBa_K208002 Version 1 (Component)Gene III Signal Peptide - Silver Fusion Compatible
SPferBBa_K809202 Version 1 (Component)signal peptide of FER
CPXBBa_I728500 Version 1 (Component)CPX Terminal Surface Display Protein with Polystyrene-Binding Peptide
pTEFBBa_K165037 Version 1 (Component)TEF2 yeast constitutive promoter
BBa_K541501BBa_K541501 Version 1 (Component)Promoter Pveg, RBS spoVG and SacB signal peptide for B. subtilis