SynBioHub

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SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

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LacI
BBa_R0010 Version 1 (Component)
promoter (lacI regulated)

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lacI+pL
BBa_R0011 Version 1 (Component)
Promoter (lacI regulated, lambda pL hybrid)

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lux pR
BBa_R0062 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pR)

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cI lam
BBa_R0051 Version 1 (Component)
promoter (lambda cI regulated)

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BBa_I741005
BBa_I741005 Version 1 (Component)
XylR Transcriptional Regulator Right Facing

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LasR+PAI
BBa_R0079 Version 1 (Component)
Promoter (LasR & PAI regulated)

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BBa_M36010
BBa_M36010 Version 1 (Component)
Transcription Terminator (Strong)

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BBa_C0261
BBa_C0261 Version 1 (Component)
AHL-making Enzyme, luxI (+RBS)

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cI+luxR
BBa_R0065 Version 1 (Component)
Promoter (lambda cI and luxR regulated -- hybrid)

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BBa_I741018
BBa_I741018 Version 1 (Component)
Right facing promoter (for xylF) controlled by xylR and CRP-cAMP

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lux pL
BBa_R0063 Version 1 (Component)
Promoter (luxR & HSL regulated -- lux pL)

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AraC
BBa_R0080 Version 1 (Component)
Promoter (AraC regulated)

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//transcriptional
transcriptional Version 1 (Collection)

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//regulator
regulator Version 1 (Collection)

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cII p22
BBa_R0053 Version 1 (Component)
Promoter (p22 cII regulated)

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RhlR+C4
BBa_R0071 Version 1 (Component)
Promoter (RhlR & C4-HSL regulated)

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BBa_I741011
BBa_I741011 Version 1 (Component)
Total XylR Transcriptional Regulator Right Facing

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BBa_K864400
BBa_K864400 Version 1 (Component)
Ptac, trp & lac regulated promoter

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cI 434
BBa_R0052 Version 1 (Component)
Promoter (434 cI regulated)

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araC
BBa_C0080 Version 1 (Component)
araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)

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Ara
BBa_K808000 Version 1 (Component)
araC-Pbad - Arabinose inducible regulatory promoter/repressor unit

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//regulation
regulation Version 1 (Collection)

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BBa_I741010
BBa_I741010 Version 1 (Component)
XylR transcriptional regulator Left Facing (I741005 reverse complement)

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BBa_I741019
BBa_I741019 Version 1 (Component)
Right facing promoter (for xylA) controlled by xylR and CRP-cAMP

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BBa_K733002
BBa_K733002 Version 1 (Component)
xylR+PxylA: A xylose inducible promoter with its transcriptional regulator.

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BBa_K360021
BBa_K360021 Version 1 (Component)
LovTAP: Blue Light Photosensor and Transcriptional Regulator

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cI lam
BBa_R1051 Version 1 (Component)
Promoter, Standard (lambda cI regulated)

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BBa_I741004
BBa_I741004 Version 1 (Component)
XylR transcriptional regulator

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BBa_I741016
BBa_I741016 Version 1 (Component)
Reverse Total XylR Transcriptional Regulator Left Facing (I741011 reverse complement

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BBa_K100010
BBa_K100010 Version 1 (Component)
RBS + XylR Transcriptional Regulator

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BBa_I723021
BBa_I723021 Version 1 (Component)
XylR transcriptional regulator

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BBa_J47864
BBa_J47864 Version 1 (Component)
xylR = xylose transcriptional regulator

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BBa_K165010
BBa_K165010 Version 1 (Component)
ADH1 yeast transcription terminator

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BLp
BBa_K238013 Version 1 (Component)
Exact promoter of the blue light receptor

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PenI
BBa_R0074 Version 1 (Component)
Promoter (PenI regulated)

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BBa_K1602016
BBa_K1602016 Version 1 (Component)
B0034-xylB-B0034-xylC

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cheZ
BBa_K629003 Version 1 (Component)
cheZ, chemotaxis regulator, protein phosphatase for CheY

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XylR
BBa_I723017 Version 1 (Component)
XylR coding region

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Pr
BBa_I723018 Version 1 (Component)
Pr (promoter for XylR)

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//function/regulation/transcriptional
function_regulation_transcriptional Version 1 (Collection)

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XylR
BO_11407 Version 1 (Component)

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cinR
BBa_R0078 Version 1 (Component)
Promoter (cinR and HSL regulated)

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BBa_K1966003
BBa_K1966003 Version 1 (Component)
lacPromoter-xylA-xylM-lacPromoter-xylB

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BBa_K2116001
BBa_K2116001 Version 1 (Component)
Transcriptional regulator esaR

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BBa_K1602009
BBa_K1602009 Version 1 (Component)
xylB

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BBa_M30109
BBa_M30109 Version 1 (Component)
Light responsive system, dual regulation

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BBa_K1357002
BBa_K1357002 Version 1 (Component)
NhaR Transcriptional Regulator

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BBa_K1602010
BBa_K1602010 Version 1 (Component)
xylC

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BBa_K1509000
BBa_K1509000 Version 1 (Component)
Coding for the trans-acting regulator SmtB

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