SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

BBa_J04450
BBa_J04450 Version 1 (Component)
RFP Coding Device

pBad/araC
BBa_I0500 Version 1 (Component)
Inducible pBad/araC promoter

Ara
BBa_K808000 Version 1 (Component)
araC-Pbad - Arabinose inducible regulatory promoter/repressor unit

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

araC
BBa_C0080 Version 1 (Component)
araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)

AraC
BBa_R0080 Version 1 (Component)
Promoter (AraC regulated)

BBa_J09855
BBa_J09855 Version 1 (Component)
Constitutive luxR device with pLuxR

Pbad-ChiXR
BBa_K564011 Version 1 (Component)
ara-->chiXR (sRNA) device

BBa_F1610
BBa_F1610 Version 1 (Component)
3OC₆HSL Sender Device

BBa_F2622
BBa_F2622 Version 1 (Component)
3OC₆HSL Receiver Device

AAR
BBa_K590032 Version 1 (Component)
Acyl-ACP Reductase (AAR) - Synechococcus elongatus PCC7942

BBa_K228001
BBa_K228001 Version 1 (Component)
SupD-tRNA

BBa_I763026
BBa_I763026 Version 1 (Component)
LacI coding device regulated by pTetR

BBa_K115002
BBa_K115002 Version 1 (Component)
RNA thermometer (FourU)

BBa_F2621
BBa_F2621 Version 1 (Component)
3OC₆HSL Receiver Device

BBa_K115001
BBa_K115001 Version 1 (Component)
RNA thermometer (ROSE)

BBa_K228009
BBa_K228009 Version 1 (Component)
AraC protein(reversed sequence) and Pbad promoter

BBa_I2032
BBa_I2032 Version 1 (Component)
T7 RNA polymerase

BBa_K564000
BBa_K564000 Version 1 (Component)
ChiX

ChiXR
BBa_K564010 Version 1 (Component)
small RNA regulating ChiX

BBa_K112808
BBa_K112808 Version 1 (Component)
Enterobacteria phage T4 Lysis Device - no promoter

BBa_I0460
BBa_I0460 Version 1 (Component)
aiiA Device (B0034.C0060.B0015)

GFP1
BBa_I715019 Version 1 (Component)
Amino Half of GFP (aka GFP1)

AraC O2
BBa_R0081 Version 1 (Component)
Inhibitor (AraC loop attachment with O2 site)

GFP2
BBa_I715020 Version 1 (Component)
Carboxyl Half of GFP (aka GFP2)

BBa_K567001
BBa_K567001 Version 1 (Component)
lacI-Ptrc-tRNA(Arg)

aa-tRNA
BBa_K1722004 Version 1 (Component)
This is a kind of aminoacyl-tRNA(aa-tRNA).

ChiXm
BBa_K564019 Version 1 (Component)
Mutated small RNA involved in RNA regulation of ChiP.

BBa_K094120
BBa_K094120 Version 1 (Component)
pLacI/ara-1

araC
BBa_K1088005 Version 1 (Component)
arabinose regulator (araC) coding sequence

BBa_K1713000
BBa_K1713000 Version 1 (Component)
Plac/ara-1, a hybrid promoter

BBa_K1151006
BBa_K1151006 Version 1 (Component)
HpNikR coding device

Rubber Fuc
BBa_K1088024 Version 1 (Component)
HRT2 prenyltransferase from Hevea Brasilianis (ara promoter without araC: arabinose inducible)

Ptet-ChiX
BBa_K564014 Version 1 (Component)
atC-->chiX

BBa_K115003
BBa_K115003 Version 1 (Component)
RNA thermometer (PrfA)

BBa_K300009
BBa_K300009 Version 1 (Component)
PoPS->3OC6HSL sender device

BBa_T9002
BBa_T9002 Version 1 (Component)
GFP Producer Controlled by 3OC6HSL Receiver Device

BBa_K564022
BBa_K564022 Version 1 (Component)
atC-->chiX

BBa_K607040
BBa_K607040 Version 1 (Component)
reverse pBad/araC promoter

BBa_K317028
BBa_K317028 Version 1 (Component)
Phototaxis Device (Atractant)