Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
ACS Synbio GenerationACS_Synbio_Generation Version 1 (Activity)Sequences pulled from the supplementals of the ACS Synthetic Biology journal as part of the SBKS project
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Unknown Alteration Sequence PullUnknown Version 1 (Activity)Used to indicate that a sequence alteration was made between the source and the submission but the nature of the alteration is unknown
pBad/araCBBa_I0500 Version 1 (Component)Inducible pBad/araC promoter
araCBBa_C0080 Version 1 (Component)araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)
AraCBBa_R0080 Version 1 (Component)Promoter (AraC regulated)
BBa_I13453BBa_I13453 Version 1 (Component)Pbad promoter
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
AraBBa_K808000 Version 1 (Component)araC-Pbad - Arabinose inducible regulatory promoter/repressor unit
pBADBBa_K206000 Version 1 (Component)pBAD strong
BBa_K228009BBa_K228009 Version 1 (Component)AraC protein(reversed sequence) and Pbad promoter
AraCBO_10845 Version 1 (Component) BBa_K1015015BBa_K1015015 Version 1 (Component)araC-pBAD-hbiF-Tc(genome insertion parts between araC and araA)
BBa_K607040BBa_K607040 Version 1 (Component)reverse pBad/araC promoter
AraC O2BBa_R0081 Version 1 (Component)Inhibitor (AraC loop attachment with O2 site)
BBa_K731201BBa_K731201 Version 1 (Component)Arabinose inducible araC-pBAD promoter
araCBBa_K1088005 Version 1 (Component)arabinose regulator (araC) coding sequence
BBa_I718008BBa_I718008 Version 1 (Component)araC-pBad-rbs-cre
BBa_K228012BBa_K228012 Version 1 (Component)AraC-Pbad-SupD
AraCBBa_I12205 Version 1 (Component)AraC
BBa_K1333315BBa_K1333315 Version 1 (Component)pBAD with araC
BBa_K577881BBa_K577881 Version 1 (Component)pC+AraC+pBad+GFPc
BBa_K1230007BBa_K1230007 Version 1 (Component)araC-pBad-rbs-LL37
Rubber FucBBa_K1088024 Version 1 (Component)HRT2 prenyltransferase from Hevea Brasilianis (ara promoter without araC: arabinose inducible)
BBa_K577882BBa_K577882 Version 1 (Component)pC+AraC+pBad+RFPc
BBa_K228005BBa_K228005 Version 1 (Component)AraC protein and Pbad promoter
BBa_K1604022BBa_K1604022 Version 1 (Component)araC-pBAD + β-carotene + J23100 + blh
araC-CysEmBBa_K731030 Version 1 (Component)Inducible araC-pBAD promoter regulating M256I CysE
BBa_K2120100BBa_K2120100 Version 1 (Component)reverse arac-pBAD
BBa_K228008BBa_K228008 Version 1 (Component)AraC regulatory protein
araC-CysEBBa_K731020 Version 1 (Component)Inducible araC-pBAD promoter regulating WT CysE
[pBad/araCBBa_J01053 Version 1 (Component)[pBad/araC][StrRBS][TraJF]
BBa_K132020BBa_K132020 Version 1 (Component)araC+Pbad/araC+cmR
BBa_K1375000BBa_K1375000 Version 1 (Component)Pcon+araC+pBAD
BBa_K876038BBa_K876038 Version 1 (Component)TT-pLasR-araC
BBa_K731250BBa_K731250 Version 1 (Component)Inducible araC-pBAD promoter with GFPmut3b, strong RBS
BBa_K731255BBa_K731255 Version 1 (Component)Inducible araC-pBAD promoter with GFPmut3b, weak RBS
AraCBBa_K1088017 Version 1 (Component)AraC device (constitutive promoter, RBS and terminator)
[pBad/araCBBa_J01054 Version 1 (Component)[pBad/araC][StrRBS][TraJF][DblTerminator][OnCFP]
BBa_K132012BBa_K132012 Version 1 (Component)cmR+araC+Pbad/araC+cmR+aiiA
araABO_32614 Version 1 (Component) AraABO_26589 Version 1 (Component)