iGEM Feature Librariesigem_feature_libraries_collection Version 1 (Unknown)A collection of iGEM feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Free Genes Feature Librariesfree_genes_feature_libraries_collection Version 1 (Unknown)A collection of Free Genes feature libraries for use with Synthetic Biology Curation Tools (SYNBICT).
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnDatabase_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
Cryptococcus neoformans Database in Synthetic Biology Open LanguageCnD_collection Version 1 (Unknown)This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.
SBOLDesigner CAD ToolSBOLDesigner Version 3.1 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.
SBOLDesigner CAD ToolSBOLDesigner Version 3.0 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
Codon Optimised Sequence Pullcodon_optimisation Version 1 (Activity)Used to indicate that a sequence was codon optimised after pulling from the source and before submission
luxIBBa_C0061 Version 1 (Component)autoinducer synthetase for AHL
SBOLDesigner CAD ToolSBOLDesigner Version 2.2 (Agent)SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.
luxIBBa_C0161 Version 1 (Component)autoinducer synthetase for AHL (no LVA)
lasIBBa_C0078 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa
BBa_K1178000BBa_K1178000 Version 1 (Component)tRNA and synthetase for 3,4-dihydroxy-L-phenylalanine (L-DOPA) incorporation at UAG codon
TnrABO_11240 Version 1 (Component) BBa_K914003BBa_K914003 Version 1 (Component)L-rhamnose-inducible promoter (pRha)
ONBY RSBBa_K1416000 Version 1 (Component)The tRNA synthetase/tRNA needed for incorporating o-(2-nitrobenzyl)-L-tyrosine (ONBY) at a UAG codon
rhIIBBa_C0070 Version 1 (Component)autoinducer synthetase for N-butyryl-HSL (BHL) and HHL
mCherryBBa_J06504 Version 1 (Component)monomeric RFP optimized for bacteria
BBa_K844000BBa_K844000 Version 1 (Component)10x-Histidine (10x-His) Tag with double stop codon (TAATAA)
FurBO_11498 Version 1 (Component) IodoY RSBBa_K1416001 Version 1 (Component)The tRNA synthetase/tRNA needed for incorporating 3-iodo-L-tyrosine (IodoY) at a UAG codon
hixCBBa_J44000 Version 1 (Component)hixC binding site for Salmonella typhimurium Hin recombinase
OMT-RSBBa_K1976020 Version 1 (Component)O-Methyl-L-tyrosine tRNA synthetase
lasIBBa_C0178 Version 1 (Component)autoinducer synthetase for PAI from Pseudomonas aeruginosa (no LVA)
cinIBBa_C0076 Version 1 (Component)autoinducer synthetase
BBa_K1051003BBa_K1051003 Version 1 (Component)Stop codon free GFP in RFC[23] standard
BBa_K1696003BBa_K1696003 Version 1 (Component)L-lactate producing part1
His-StopBBa_K133133 Version 1 (Component)His affinity tag-stop
BBa_K1148014BBa_K1148014 Version 1 (Component)promoter hlbA from L. bulgaricus
BBa_J04031BBa_J04031 Version 1 (Component)GFP w/LVA tag
ldhE-LcBBa_K1696001 Version 1 (Component)L-Lactate producing module from Lactobacillus casei
BBa_K1690003BBa_K1690003 Version 1 (Component)Mating pheromone (L. elongisporus)
BBa_K1051000BBa_K1051000 Version 1 (Component)Stop codon free RFP in RFC[23] standard
BBa_K1660002BBa_K1660002 Version 1 (Component)l-limonene synthase
BBa_K325210BBa_K325210 Version 1 (Component)Red Firefly Luciferase and LRE<BR><i>L. Cruciata<BR>(E. coli optimised)</i>
BBa_K115002BBa_K115002 Version 1 (Component)RNA thermometer (FourU)
Mj TyrRSBBa_K1492002 Version 1 (Component)Methanococcus jannaschii tyrosyl-tRNA synthetase
BBa_K302002BBa_K302002 Version 1 (Component)SR1 antisense RNA (L-arginine)
BBa_K200008BBa_K200008 Version 1 (Component)Phenylalanine hydroxylase
BBa_I718004BBa_I718004 Version 1 (Component)DapA Coli MG1655
tetA(L)BO_32327 Version 1 (Component) BBa_K1124107BBa_K1124107 Version 1 (Component)pLac-hpaBC-plambda-sRNA(anti-tyrR)-plambda-sRNA (anti-csrA) (L-DOPA synthesis device)
HABBa_I712008 Version 1 (Component)HA affinity tag
BBa_K115001BBa_K115001 Version 1 (Component)RNA thermometer (ROSE)
BBa_I2032BBa_I2032 Version 1 (Component)T7 RNA polymerase
NLSBBa_J176008 Version 1 (Component)NLS
BBa_M1700BBa_M1700 Version 1 (Component)L. Johnsonii transcription terminator