Cryptococcus neoformans Database in Synthetic Biology Open Language
CnDatabase_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

Cryptococcus neoformans Database in Synthetic Biology Open Language
CnD_collection Version 1 (Unknown)
This is a collection of Biological Genetic Parts of Cryptococcus neoformans containing 23 different promoters, coding sequences and terminators, which were previously used and whose efficacy has already been proven in this organism. This work was made in order to facilitate the build and assembly of genetic circuits and plasmids for the study of this pathogen.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.1 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are the ability to add variant collections to combinatorial derivations, enumerating those collections, and the ability to view sequence features hierarchically. There are also some small changes to the way that preferences work in regards to saving a design with incomplete sequences.

SBOLDesigner CAD Tool
SBOLDesigner Version 3.0 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Reverse Orientation Sequence Pull
reverse_orientation Version 1 (Activity)
Used to indicate that a sequence's orientation was reversed (e.g. 3' to 5' becomes 5' to 3') after pulling from the source and before submission

Sequence Pull with Mutations
mutations Version 1 (Activity)
Used to indicate that a sequence had mutations added after pulling from the source and before submission

Codon Optimised Sequence Pull
codon_optimisation Version 1 (Activity)
Used to indicate that a sequence was codon optimised after pulling from the source and before submission

SBOLDesigner CAD Tool
SBOLDesigner Version 2.2 (Agent)
SBOLDesigner is a simple, biologist-friendly CAD software tool for creating and manipulating the sequences of genetic constructs using the Synthetic Biology Open Language (SBOL) 2.0 data model. Throughout the design process, SBOL Visual symbols, a system of schematic glyphs, provide standardized visualizations of individual parts. SBOLDesigner completes a workflow for users of genetic design automation tools. It combines a simple user interface with the power of the SBOL standard and serves as a launchpad for more detailed designs involving simulations and experiments. Some new features in SBOLDesigner are SynBioHub integration, local repositories, importing of parts/sequences from existing files, import and export of GenBank and FASTA files, extended role ontology support, the ability to partially open designs with multiple root ComponentDefinitions, backward compatibility with SBOL 1.1, and versioning.

Truncated Sequence Pull
Truncated Version 1 (Activity)
Used to indicate that a sequence was truncated after pulling from the source and before submission

araC
BBa_C0080 Version 1 (Component)
araC arabinose operon regulatory protein (repressor/activator) from E. coli (+LVA)

BBa_K343100
BBa_K343100 Version 1 (Component)
Flagella master regulating operon

BBa_K343000
BBa_K343000 Version 1 (Component)
Mutated flagella master regulator (FlhDC mut).

BBa_I13458
BBa_I13458 Version 1 (Component)
promoter C and arabinose C operon

MotB
BBa_S03271 Version 1 (Component)
MotB: RBS+flagellar protein

BBa_K343004
BBa_K343004 Version 1 (Component)
Flagella overekspression

GC Optimised Sequence Pull
GC_Optimised Version 1 (Activity)
Used to indicate that a sequence was GC optimised after pulling from the source and before submission

BBa_K322123
BBa_K322123 Version 1 (Component)
Phycobilin synthesis operon without terminator

BBa_I746104
BBa_I746104 Version 1 (Component)
P2 promoter in agr operon from S. aureus

fliC_MCS
BBa_K1617000 Version 1 (Component)
Modular Flagellin - FliC_MCS

Operon2
BBa_K808007 Version 1 (Component)
putative terephtalate uptake operon2

BBa_J09271
BBa_J09271 Version 1 (Component)
motB flagellar protein, without endogenous RBS

mRFP sel.
BBa_K1362422 Version 1 (Component)
mRFP selection marker with outward BsaI restriction sites

BBa_K909000
BBa_K909000 Version 1 (Component)
Phycocyanobilin synthesis operon

BBa_K1758120
BBa_K1758120 Version 1 (Component)
RNase E regulating protein RraA

BBa_K769010
BBa_K769010 Version 1 (Component)
lux operon

BBa_K805015
BBa_K805015 Version 1 (Component)
CsgD, the master regulator of biofilm formation

BBa_K1499000
BBa_K1499000 Version 1 (Component)
wssF gene from wss operon

BBa_K1351005
BBa_K1351005 Version 1 (Component)
SigD-dependent flagellin promoter (Phag) of Bacillus subtilis

hycAp
BBa_K778000 Version 1 (Component)
hycAp: Promoter of hyc operon activated by FhlA

PrFe
BBa_J3902 Version 1 (Component)
PrFe (PI + PII rus operon)

BBa_M30109
BBa_M30109 Version 1 (Component)
Light responsive system, dual regulation

BBa_K769020
BBa_K769020 Version 1 (Component)
lux operon(K769011) + lumP(K769019)

BBa_K769022
BBa_K769022 Version 1 (Component)
lux operon(K769011) + GFP(I13522)

BBa_K1355001
BBa_K1355001 Version 1 (Component)
Regulation and transport of mercury ions

BBa_K1795024
BBa_K1795024 Version 1 (Component)
KanR Operon under R0010

BBa_K729003
BBa_K729003 Version 1 (Component)
csgBAEFG operon

araC-CysEm
BBa_K731030 Version 1 (Component)
Inducible araC-pBAD promoter regulating M256I CysE

BBa_K1963010
BBa_K1963010 Version 1 (Component)
An sRNA system for down-regulation of E. coli fliC encoding flagellin

BBa_K1963004
BBa_K1963004 Version 1 (Component)
An sRNA system for down-regulation of E. coli fliC encoding flagellin.

BBa_K1963011
BBa_K1963011 Version 1 (Component)
An sRNA system for down-regulation of Serratia marcescens fliC encoding flagellin.

BBa_K2184033
BBa_K2184033 Version 1 (Component)
SNP for non-taster coffee bitterness taste- TAS2R3 RS765007